PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG77539.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 2094aa MW: 234964 Da PI: 8.5888

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG77539.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	26.9	1.3e-08	1886	1949	11	76
trihelix 11 iearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsess 76 ++ar e+ e+l++gk ++ W+ vsk m+++ +r++++Ck +w+ +++ y ++++++k+ s++ GBG77539.1 1886 LAARAEKSEKLGNGKGVGKVWDVVSKDMEAGRWNREAEECKRRWNVVRWWYNELADNDKR--SGHA 1949 68999***************************************************9998..3443 PP

Sequence ? help Back to Top
Protein Sequence Length: 2094 aa Download sequence
MPRQQCHVSN SATSAVPHQQ QCHVSSATSA TVPRQQCHVS SATSAVPRQQ QCHSRLSAYR 60 LKRRQKLNKA DTDTQARRKE AQDLLHRHEA ASIEKLKFWH FEPSEEHDDE TPEEQHKEFM 120 AKLMTRLVYT CNHLQSELAI LRRAMQSHKD LHEDAIRALH SRVQDLEQVA PRPNVGETNS 180 APSTRQLEER VDHVVAMLSD ISTFAAPATI SNQLDTLKTE VQQLQQLPNN TTQHYKMSTF 240 QIEKFDDYTH QDPVIWWEGF TTQLRIMFVP KHLYIRALFL NSKGGCEIWL SHLATVHGVD 300 VADLKDKISW EELTRLWKKR FIVDDAPTLA INRLFAMTQG NTTTRDWLIE WQKIAATPDL 360 ELPFSHLRRE FYNRSCAALS LALGDREQYA TFTEIIDKAR EIIKTNRAAA HEKSAWQPTY 420 VEKGKFGPRS QHVAAVHTDN IVEDPAATQA SREGDQVVVV QPRSNNKSQA NGKEAAELEA 480 ATDHSRREYM LQQLNKALTD DRCAQVTKHM AEMILLEHKI TSSQFTNWDD CFVRLERRVD 540 DLSAQQSKIL DAIQSLTAQL PAAKLIAPQL PLLKPKPSPP SSPPSTPPGS VHSSRSPSHS 600 QKASGKATYA AVTAGDQRGP KIPAPNKFRG DDPKTDVGDW AAGTRAYLRG FVYAEQTKVA 660 TVLGLLEGPA LKWATSTSSS LQQSMEDWAF GLGVDKFLQA LEDRFADKER ARKAADRIAR 720 LGQQRYSGTL QALFAEFEQL TSTPGLVMST DDLLTNFCKA APEKFVVALY SAGHKDWRSF 780 GRAALEMEAK LHVQAPSSDR RKDSQDDAPS AGTGSVADLD VAAAVTQAVL GVVQLQRKFS 840 LTTASATAKG KDKGRRPSSS QRPNLPKDVQ MPEVRGAALP EGLPLHARPK SVKKLKQTLG 900 TAVPPRAAPS STQVDESAAV SVETVCDDDC LGTARAASFC YEDPDPDQDP GQDELQSLAA 960 FFLHLKEQKK CKSYLIMLRP LINHTRITGL LDCGATRNFM SPSAVKKLHL GMKVQQLQQP 1020 LLVRIGDSTV LSIRERVKGI PMTFDSVGEV RHSLNFYIFL ELPFELVFSM QWLKAVNPRI 1080 DWQIPKIELP NSQGVYQPCI IVADHHPKTS CYCLRVREFH ALSRQYHHER LFIALVKQTD 1140 APPVSCPPEI QQVVDQYANL MQEPFGLPNR PTKHRIELLP GAVPPKGRIY RMSPAELEEL 1200 RKQLETLTSK DWIRPNTSEF GAPVLFVPKG NGEFRMCIDY RGLNKITRKS TEPLPRIDDL 1260 LDMAQGCTVF SKVDLKSFYH QIEMAEEDVY KTAFKTRLVM PFGLCNAPGT FQTEMHRIFR 1320 PYLDKFMVVY LNDILVFSKT AREHAEHLAL VLQSLRDSQY KINREKSSFG VPSVIYLGHV 1380 IFGDGLAPEA AKIAAIQEWP QPQTVRDVRS FMGLASYYGK FVRNFYAVAA PLTNLTKKDT 1440 PFLWSLHCQL AFTRLKKALT RAPVLKLPDP TLPFILTTDA SQYGIGAVLQ QDDGNGLRPV 1500 EFMSKKIRTQ KLQDSTYEKE LYALVCALKH WKHFLLGRHF KIFSDHSTLQ WMKSQGELND 1560 KLARYIQFID MFDFELKHKK VCYNKVADAL SRRSDSFAPI SSTHSFGEET HQTIARLLPQ 1620 DETFGPIVRN LQTDPNSESG YTLSSDLLYT YSRGEERLCI PQDQRLRTLL MSECHDARGH 1680 FGFLKSYAAL SQRFFWKEMR SDMLRYVDTC ELCQRDKVHR RPPLGLLKPL PIPDGPVESV 1740 SIDFTDLGKT TPRGMRQVMV CVDRFAKYAE FIPLPEVARV PAVRAALSES AVMEQRSCTP 1800 GFARQDDGRS VGVADGGYHM QPSLVLSSYA SDDCMDAVRQ QLIHRVQGMQ SSTSPLLLRS 1860 ALEGSVVGMQ PSDEYMASAA PRPLQLAARA EKSEKLGNGK GVGKVWDVVS KDMEAGRWNR 1920 EAEECKRRWN VVRWWYNELA DNDKRSGHAK YFRMTPAEWI EANLKFNFRR SWYNLLEQYF 1980 RSGKSKALHP GHLQDLGAEE ESSPPVAGQE AVQEGAGEGG AQEAAAQEAA GGDAGAPRGP 2040 SASSSSTVMA MTDSTPARKR SLPTSRAGLA TLAQSFTATP CLSYLTTNLL DNNR

Sequence ? help Back to Top

Protein Sequence Length: 2094 aa Download sequence

MPRQQCHVSN SATSAVPHQQ QCHVSSATSA TVPRQQCHVS SATSAVPRQQ QCHSRLSAYR  60
LKRRQKLNKA DTDTQARRKE AQDLLHRHEA ASIEKLKFWH FEPSEEHDDE TPEEQHKEFM  120
AKLMTRLVYT CNHLQSELAI LRRAMQSHKD LHEDAIRALH SRVQDLEQVA PRPNVGETNS  180
APSTRQLEER VDHVVAMLSD ISTFAAPATI SNQLDTLKTE VQQLQQLPNN TTQHYKMSTF  240
QIEKFDDYTH QDPVIWWEGF TTQLRIMFVP KHLYIRALFL NSKGGCEIWL SHLATVHGVD  300
VADLKDKISW EELTRLWKKR FIVDDAPTLA INRLFAMTQG NTTTRDWLIE WQKIAATPDL  360
ELPFSHLRRE FYNRSCAALS LALGDREQYA TFTEIIDKAR EIIKTNRAAA HEKSAWQPTY  420
VEKGKFGPRS QHVAAVHTDN IVEDPAATQA SREGDQVVVV QPRSNNKSQA NGKEAAELEA  480
ATDHSRREYM LQQLNKALTD DRCAQVTKHM AEMILLEHKI TSSQFTNWDD CFVRLERRVD  540
DLSAQQSKIL DAIQSLTAQL PAAKLIAPQL PLLKPKPSPP SSPPSTPPGS VHSSRSPSHS  600
QKASGKATYA AVTAGDQRGP KIPAPNKFRG DDPKTDVGDW AAGTRAYLRG FVYAEQTKVA  660
TVLGLLEGPA LKWATSTSSS LQQSMEDWAF GLGVDKFLQA LEDRFADKER ARKAADRIAR  720
LGQQRYSGTL QALFAEFEQL TSTPGLVMST DDLLTNFCKA APEKFVVALY SAGHKDWRSF  780
GRAALEMEAK LHVQAPSSDR RKDSQDDAPS AGTGSVADLD VAAAVTQAVL GVVQLQRKFS  840
LTTASATAKG KDKGRRPSSS QRPNLPKDVQ MPEVRGAALP EGLPLHARPK SVKKLKQTLG  900
TAVPPRAAPS STQVDESAAV SVETVCDDDC LGTARAASFC YEDPDPDQDP GQDELQSLAA  960
FFLHLKEQKK CKSYLIMLRP LINHTRITGL LDCGATRNFM SPSAVKKLHL GMKVQQLQQP  1020
LLVRIGDSTV LSIRERVKGI PMTFDSVGEV RHSLNFYIFL ELPFELVFSM QWLKAVNPRI  1080
DWQIPKIELP NSQGVYQPCI IVADHHPKTS CYCLRVREFH ALSRQYHHER LFIALVKQTD  1140
APPVSCPPEI QQVVDQYANL MQEPFGLPNR PTKHRIELLP GAVPPKGRIY RMSPAELEEL  1200
RKQLETLTSK DWIRPNTSEF GAPVLFVPKG NGEFRMCIDY RGLNKITRKS TEPLPRIDDL  1260
LDMAQGCTVF SKVDLKSFYH QIEMAEEDVY KTAFKTRLVM PFGLCNAPGT FQTEMHRIFR  1320
PYLDKFMVVY LNDILVFSKT AREHAEHLAL VLQSLRDSQY KINREKSSFG VPSVIYLGHV  1380
IFGDGLAPEA AKIAAIQEWP QPQTVRDVRS FMGLASYYGK FVRNFYAVAA PLTNLTKKDT  1440
PFLWSLHCQL AFTRLKKALT RAPVLKLPDP TLPFILTTDA SQYGIGAVLQ QDDGNGLRPV  1500
EFMSKKIRTQ KLQDSTYEKE LYALVCALKH WKHFLLGRHF KIFSDHSTLQ WMKSQGELND  1560
KLARYIQFID MFDFELKHKK VCYNKVADAL SRRSDSFAPI SSTHSFGEET HQTIARLLPQ  1620
DETFGPIVRN LQTDPNSESG YTLSSDLLYT YSRGEERLCI PQDQRLRTLL MSECHDARGH  1680
FGFLKSYAAL SQRFFWKEMR SDMLRYVDTC ELCQRDKVHR RPPLGLLKPL PIPDGPVESV  1740
SIDFTDLGKT TPRGMRQVMV CVDRFAKYAE FIPLPEVARV PAVRAALSES AVMEQRSCTP  1800
GFARQDDGRS VGVADGGYHM QPSLVLSSYA SDDCMDAVRQ QLIHRVQGMQ SSTSPLLLRS  1860
ALEGSVVGMQ PSDEYMASAA PRPLQLAARA EKSEKLGNGK GVGKVWDVVS KDMEAGRWNR  1920
EAEECKRRWN VVRWWYNELA DNDKRSGHAK YFRMTPAEWI EANLKFNFRR SWYNLLEQYF  1980
RSGKSKALHP GHLQDLGAEE ESSPPVAGQE AVQEGAGEGG AQEAAAQEAA GGDAGAPRGP  2040
SASSSSTVMA MTDSTPARKR SLPTSRAGLA TLAQSFTATP CLSYLTTNLL DNNR