PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG77367.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 1148aa MW: 125674 Da PI: 8.5651

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG77367.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	31.4	4.9e-10	247	319	2	66
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkike 66 Wt ++ aLi+++r+ +++l + k k +We+v k++ + g+ +r+++ C +kw+nl +++k + + GBG77367.1 247 WTVEHMIALIRVKRDQDSHLVglghnygQMKTKTWKWEDVEKRLVQMGVtSRKAVDCGKKWDNLYQQFKSVHK 319 ************666665533222226789999*****99999899***************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 1148 aa Download sequence
MADLYRRPPL LLLVALLLLI VVVFHICFLD RVPGRKQTRR TPKRSTKMDK LRTKTTMSVG 60 GGGSSRQRCN GAEGGRRPYD PTLYSHLPSQ EIPLPPSDDD VDDPRSSTVP LGIGSTQDWM 120 GSQVYRHAST PTYTDLLEGR TPAGYHAGLF DLRFGLSITR GVARISVGAE DEFEDCAGGG 180 GEEIAADDGG DDNDKDDDGE MEIRLVGRKR GGSTARTKVR ESRTGRKGKK CGEESWAGDG 240 TKSRDFWTVE HMIALIRVKR DQDSHLVGLG HNYGQMKTKT WKWEDVEKRL VQMGVTSRKA 300 VDCGKKWDNL YQQFKSVHKF MGEFGKPNFF TLTPGERRER GFDFMMDERV YSEMKAMSGG 360 DHTIHPTNLA DTGAPGGVQL PGTVGGRDES GGSDMGGAVR TTIVDRRGIR RWVFWDARGI 420 WRIGEPGLFG GGRGRMGGGV FVPPVRSACA PSCLVHHAED DLHGTRKFVC CESTKVRAVV 480 DGLACPWCDA RPRTIQKGIP GGIPYRWHSI ATTPKTPSVH GIVVTGVVIR LSRYDRRVWA 540 PRASTSSCIH VSQAACHRTG PSSTAAKRLI INVVRRQGAH HRPPTAPSFP LSTWSFIHVS 600 QAPQLFAFDT HFFVDDMAPC DTSGKAKRNS GSGDDGETQK GRGHIPKSKR PRFDDDSSEH 660 SGDLHGEEES MVNAQGADVM KQLGFGRDRV SRDQLAALKQ DLVGGVVVSL ARTPKSVGIV 720 MTDARVARQV PPKVGQVAPR QPIPALQAGT SGVEKTPSAQ KVDTTAGGGR TTAADNTTGS 780 GVAEGAGEGR VDDVRRDDGR KDARGGGDDD YDCLVSAIVK KGVKEDDLEE RSKLWIDCDA 840 FWGQGPGKPL REAVGDCTDY FITIANRDAG AEPPSMLVMQ PNDVPRFKID DPAQREPALR 900 RARNVEKVVL RAIHGWIFKS SSRSTGLARA ESYVTVDFAT DVARVVWQAL EWSKVVSLAL 960 VYHTLAMKMD VPLWFAGVKI VIRPEDDDMA ARQEATVLRL ADCWTNAVWC GQWGDGGRVK 1020 QDRLTCLADC FRVLLSACMW IMRMGGDDDR SHYEASFYAS MVAKPTLIAA GSYIFNWRRH 1080 IVDTANLVLD RLGKAHLTLG DYLHCIPKWA DCGLVFSHNA ALKNAAKAAK HGWIGNGPPA 1140 DDDGDDEK

Sequence ? help Back to Top

Protein Sequence Length: 1148 aa Download sequence

MADLYRRPPL LLLVALLLLI VVVFHICFLD RVPGRKQTRR TPKRSTKMDK LRTKTTMSVG  60
GGGSSRQRCN GAEGGRRPYD PTLYSHLPSQ EIPLPPSDDD VDDPRSSTVP LGIGSTQDWM  120
GSQVYRHAST PTYTDLLEGR TPAGYHAGLF DLRFGLSITR GVARISVGAE DEFEDCAGGG  180
GEEIAADDGG DDNDKDDDGE MEIRLVGRKR GGSTARTKVR ESRTGRKGKK CGEESWAGDG  240
TKSRDFWTVE HMIALIRVKR DQDSHLVGLG HNYGQMKTKT WKWEDVEKRL VQMGVTSRKA  300
VDCGKKWDNL YQQFKSVHKF MGEFGKPNFF TLTPGERRER GFDFMMDERV YSEMKAMSGG  360
DHTIHPTNLA DTGAPGGVQL PGTVGGRDES GGSDMGGAVR TTIVDRRGIR RWVFWDARGI  420
WRIGEPGLFG GGRGRMGGGV FVPPVRSACA PSCLVHHAED DLHGTRKFVC CESTKVRAVV  480
DGLACPWCDA RPRTIQKGIP GGIPYRWHSI ATTPKTPSVH GIVVTGVVIR LSRYDRRVWA  540
PRASTSSCIH VSQAACHRTG PSSTAAKRLI INVVRRQGAH HRPPTAPSFP LSTWSFIHVS  600
QAPQLFAFDT HFFVDDMAPC DTSGKAKRNS GSGDDGETQK GRGHIPKSKR PRFDDDSSEH  660
SGDLHGEEES MVNAQGADVM KQLGFGRDRV SRDQLAALKQ DLVGGVVVSL ARTPKSVGIV  720
MTDARVARQV PPKVGQVAPR QPIPALQAGT SGVEKTPSAQ KVDTTAGGGR TTAADNTTGS  780
GVAEGAGEGR VDDVRRDDGR KDARGGGDDD YDCLVSAIVK KGVKEDDLEE RSKLWIDCDA  840
FWGQGPGKPL REAVGDCTDY FITIANRDAG AEPPSMLVMQ PNDVPRFKID DPAQREPALR  900
RARNVEKVVL RAIHGWIFKS SSRSTGLARA ESYVTVDFAT DVARVVWQAL EWSKVVSLAL  960
VYHTLAMKMD VPLWFAGVKI VIRPEDDDMA ARQEATVLRL ADCWTNAVWC GQWGDGGRVK  1020
QDRLTCLADC FRVLLSACMW IMRMGGDDDR SHYEASFYAS MVAKPTLIAA GSYIFNWRRH  1080
IVDTANLVLD RLGKAHLTLG DYLHCIPKWA DCGLVFSHNA ALKNAAKAAK HGWIGNGPPA  1140
DDDGDDEK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	39	45	RRTPKRS
2	430	439	GGGRGRMGGG
3	431	440	GGGRGRMGGG