PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG77297.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 891aa MW: 95646.5 Da PI: 6.8345

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG77297.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	30.2	1.2e-09	498	574	2	70
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekk 70 Wt ++ aLi+a+r ++++++r k k +W++v k++ + g+ +r+ + C +kw+nl +++k + + +++ GBG77297.1 498 WTVEHMIALIRAKRdqdlhlaGLGHNYGRMKTKTWKWDDVEKRLVQMGVtSRKTVDCGKKWDNLYQQFKSVHKLMGE 574 ************66666666667777899*********99999899***************99887665 PP

Sequence ? help Back to Top
Protein Sequence Length: 891 aa Download sequence
MGVSPTQSPP SVARDRGARL SAPTSAAGRP RKRGQATVGA LASLLGRTDI PWSNTRRSTA 60 ATTKRQPGLG RRRSSTSSAR EVHAAGFEHR GGSGADVEGA GGRGSTAPGA RVSTHGLREV 120 SQILGADVLG PPRTQRPIPR RASHLEGETT GGEGLEMMRG RRRMDTLLEA SRREMRRDGI 180 TVVDDDQNDI AAEEADGEED LSIHEARQTS LERGERAEGG KRLYDPMLYR HLPSHEIPLP 240 LSDDDVDDPR SSTVPLGSGS TQDWMGSQLY RHASTPTYTD LLDGRTPAGY DAGLVDLSFG 300 LRSGSGEDLT HTVGVNPTSP TKHTSPSVRV AGPADSRGFV SARRVALSTA SVVASRTKTT 360 GLAGCRTMPP SGTMDGEGDD DERAAIEVVD RQFWDDERQR LRSANTSSIT RGVARMSVGP 420 EDVFVDCYGG GGEEIASDDG SDDNDEDDDG EMEIRPVGRK RGGSRATTKV RESRTGRQGK 480 KCAEESSVGD GTKSRDFWTV EHMIALIRAK RDQDLHLAGL GHNYGRMKTK TWKWDDVEKR 540 LVQMGVTSRK TVDCGKKWDN LYQQFKSVHK LMGESGKPNF FTLTSGERRE RGFNFRMDER 600 VYSEKKAMSR ADHTKHPTNL VDTGVPGGVQ MPAPLGRRNV SGGSDGGGDG QDDDHGSTRH 660 SSLSGGGGGG AGKRKNARHQ IFEAMANVMK EHGSEHTADF QAEDVSMVDA QGPDVIKRLG 720 FGWDGVSREQ LAALKQGLVG GVTVTLARAP KAGGIVMTDA CVLRQVPPMV GHGQPRQSLP 780 AQQAGASGVE KTPSAQKVDT TACRSPTAAA DNTAGSRVAE AADNTVGSRV TEAAEEGRVD 840 DIRRDDGRKD ARGGGDDDDD RPVSAMVKRG AKEDDLEERS NLWIDYDAFW V

Sequence ? help Back to Top

Protein Sequence Length: 891 aa Download sequence

MGVSPTQSPP SVARDRGARL SAPTSAAGRP RKRGQATVGA LASLLGRTDI PWSNTRRSTA  60
ATTKRQPGLG RRRSSTSSAR EVHAAGFEHR GGSGADVEGA GGRGSTAPGA RVSTHGLREV  120
SQILGADVLG PPRTQRPIPR RASHLEGETT GGEGLEMMRG RRRMDTLLEA SRREMRRDGI  180
TVVDDDQNDI AAEEADGEED LSIHEARQTS LERGERAEGG KRLYDPMLYR HLPSHEIPLP  240
LSDDDVDDPR SSTVPLGSGS TQDWMGSQLY RHASTPTYTD LLDGRTPAGY DAGLVDLSFG  300
LRSGSGEDLT HTVGVNPTSP TKHTSPSVRV AGPADSRGFV SARRVALSTA SVVASRTKTT  360
GLAGCRTMPP SGTMDGEGDD DERAAIEVVD RQFWDDERQR LRSANTSSIT RGVARMSVGP  420
EDVFVDCYGG GGEEIASDDG SDDNDEDDDG EMEIRPVGRK RGGSRATTKV RESRTGRQGK  480
KCAEESSVGD GTKSRDFWTV EHMIALIRAK RDQDLHLAGL GHNYGRMKTK TWKWDDVEKR  540
LVQMGVTSRK TVDCGKKWDN LYQQFKSVHK LMGESGKPNF FTLTSGERRE RGFNFRMDER  600
VYSEKKAMSR ADHTKHPTNL VDTGVPGGVQ MPAPLGRRNV SGGSDGGGDG QDDDHGSTRH  660
SSLSGGGGGG AGKRKNARHQ IFEAMANVMK EHGSEHTADF QAEDVSMVDA QGPDVIKRLG  720
FGWDGVSREQ LAALKQGLVG GVTVTLARAP KAGGIVMTDA CVLRQVPPMV GHGQPRQSLP  780
AQQAGASGVE KTPSAQKVDT TACRSPTAAA DNTAGSRVAE AADNTVGSRV TEAAEEGRVD  840
DIRRDDGRKD ARGGGDDDDD RPVSAMVKRG AKEDDLEERS NLWIDYDAFW V