PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG77207.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

GATA

Protein Properties

Length: 620aa MW: 69164.5 Da PI: 7.2847

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG77207.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	49.4	6.3e-16	235	271	1	35
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg + Tp++Rrgp+g++tLCnaCGl+++ kg+ GBG77207.1 235 CVHCGIGErsTPMMRRGPSGPRTLCNACGLMWANKGV 271 **866666**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 620 aa Download sequence
MSQAEVDTQG QQGDAQVPHG PQQVRQGGVQ TGELDRSGHQ TIVPGDAVMA LDTVGVDGVD 60 DDSPEEGLDG DGDLHCDPQT GVDMGAGPMT VSSPNPNQLT LSYRGEVYVF ETVSPEKMEM 120 VLMVLGGREL PAGIAGLAVA SHHHHHKRMH GMSEYPARMN LPQRLASLTR FREKRKERNY 180 DKKIRYTVRK EVAQRMQRKK GQFASSRVIG EDGNAVNSWN GSQTNASGPQ QEMTCVHCGI 240 GERSTPMMRR GPSGPRTLCN ACGLMWANKG VLRDLTKTPV ATMNSVQQQQ SLHPHHQQQQ 300 QQQTQPQQPQ QVFLQSSQPV LQAHQQSYSA ALAHSHPHAH QATHHQVGTI QGLQETTQHM 360 QHSVDGGPQV ITTMMTTTTA MMMMMMMVMM MMTMMTTTAM TMMVMMMMMV MMMMTMMTTT 420 AMTMMVMMMM MVMMMMTMMV MMMMMMMVMM MMVMMMMTMM TTTTAMMMMM MTMDDIMIMA 480 TTTMDYVVMM VTTMTTMTTT TTAMATTMMT TTTAMMMMMM MMMMMMMMMM RVMMMMTTTT 540 AMMMMMVMMM MMMMMMVRQL RVGVKRLWVG CDLQVVPSAP PGSVAMHADS LQNATQILPK 600 PEHAVVMANG GGLSSMNAAG

Sequence ? help Back to Top

Protein Sequence Length: 620 aa Download sequence

MSQAEVDTQG QQGDAQVPHG PQQVRQGGVQ TGELDRSGHQ TIVPGDAVMA LDTVGVDGVD  60
DDSPEEGLDG DGDLHCDPQT GVDMGAGPMT VSSPNPNQLT LSYRGEVYVF ETVSPEKMEM  120
VLMVLGGREL PAGIAGLAVA SHHHHHKRMH GMSEYPARMN LPQRLASLTR FREKRKERNY  180
DKKIRYTVRK EVAQRMQRKK GQFASSRVIG EDGNAVNSWN GSQTNASGPQ QEMTCVHCGI  240
GERSTPMMRR GPSGPRTLCN ACGLMWANKG VLRDLTKTPV ATMNSVQQQQ SLHPHHQQQQ  300
QQQTQPQQPQ QVFLQSSQPV LQAHQQSYSA ALAHSHPHAH QATHHQVGTI QGLQETTQHM  360
QHSVDGGPQV ITTMMTTTTA MMMMMMMVMM MMTMMTTTAM TMMVMMMMMV MMMMTMMTTT  420
AMTMMVMMMM MVMMMMTMMV MMMMMMMVMM MMVMMMMTMM TTTTAMMMMM MTMDDIMIMA  480
TTTMDYVVMM VTTMTTMTTT TTAMATTMMT TTTAMMMMMM MMMMMMMMMM RVMMMMTTTT  540
AMMMMMVMMM MMMMMMVRQL RVGVKRLWVG CDLQVVPSAP PGSVAMHADS LQNATQILPK  600
PEHAVVMANG GGLSSMNAAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51600.2	1e-69	GATA family protein