PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG77126.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 517aa MW: 54454.4 Da PI: 7.967

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG77126.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	36.7	1.1e-11	420	496	2	71
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71 W ++e++ L+ +r e+ ++l++++++ + W +s+++ + gfer+ +Ck++w+ + k yk i +++++ GBG77126.1 420 WGDDETMMLLSMRCefkcgkgEDSKALGKACSIHNVWGFISARLIAAGFERTRDMCKNRWNFVYKNYKLIVDNDRRS 496 ***********98888888889999999**************************************9999874 PP

Sequence ? help Back to Top
Protein Sequence Length: 517 aa Download sequence
MRHCGSMFMA SELRTRASGR FTAPLMANDI SVLVCTSQFI MQGKDMEFAT VERTATAQSP 60 SERACGVYEN LAVDIPVSSA MHFSDVVGKV MCTVGSEGTM SQCLAMDAHA GGGLHTSVTS 120 VTTQDNSHTA VVVDGSRCIE ADGVGCAHSE MRVKRAHSFS QRMIAVHGSS RMASTVGHGV 180 EISMQSKTVH TYDDFQSAMI GCLPINVCRD GGVHSTRGAQ TLVADCQSPT SVYGSLIVDG 240 RGVGFGPAAD KMDIHHLRDM LLWRRAVAAC DGGNAGRSQG VAGHKRATTK GSRRGSSGRT 300 ATDPIGSTTA PKSNALHMNK GSKRACIADL NGPPTSMPSQ SDNGVSASDE NGAPGNVAGS 360 SGVVGLDEIG SQDECAVGVA CVSGVRIPSA ERIDGDVGVV ACKKAARKKP VSNPGKTPNW 420 GDDETMMLLS MRCEFKCGKG EDSKALGKAC SIHNVWGFIS ARLIAAGFER TRDMCKNRWN 480 FVYKNYKLIV DNDRRSGAQN PAILLDNITE SHGNGEP

Sequence ? help Back to Top

Protein Sequence Length: 517 aa Download sequence

MRHCGSMFMA SELRTRASGR FTAPLMANDI SVLVCTSQFI MQGKDMEFAT VERTATAQSP  60
SERACGVYEN LAVDIPVSSA MHFSDVVGKV MCTVGSEGTM SQCLAMDAHA GGGLHTSVTS  120
VTTQDNSHTA VVVDGSRCIE ADGVGCAHSE MRVKRAHSFS QRMIAVHGSS RMASTVGHGV  180
EISMQSKTVH TYDDFQSAMI GCLPINVCRD GGVHSTRGAQ TLVADCQSPT SVYGSLIVDG  240
RGVGFGPAAD KMDIHHLRDM LLWRRAVAAC DGGNAGRSQG VAGHKRATTK GSRRGSSGRT  300
ATDPIGSTTA PKSNALHMNK GSKRACIADL NGPPTSMPSQ SDNGVSASDE NGAPGNVAGS  360
SGVVGLDEIG SQDECAVGVA CVSGVRIPSA ERIDGDVGVV ACKKAARKKP VSNPGKTPNW  420
GDDETMMLLS MRCEFKCGKG EDSKALGKAC SIHNVWGFIS ARLIAAGFER TRDMCKNRWN  480
FVYKNYKLIV DNDRRSGAQN PAILLDNITE SHGNGEP