PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG76668.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 520aa MW: 57726.7 Da PI: 6.4245

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG76668.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	35	3.6e-11	266	341	2	71
trihelix 2 WtkqevlaLiearr......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71 W +e l L++ +r ++++++ + k k+ +W ++s++mr++g+ r C ++wen+ + ykk+ e+e+++ GBG76668.1 266 WDLNESLILVRCKRnqdylaNVGSNFAQMKTKEWKWTDISNQMRQQGVMRDWDSCMKRWENVIGHYKKVLEREESG 341 778888888999886665556667777778*****************************************99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 520 aa Download sequence
MGESRLGAGR EHGMERAGFT SGTDMREHRF DPALYSHLPS CKQPLPDDNH WEPPPSTLPL 60 GWGSTQTSYN MVGIPHRRAR SLGPMSTLLD EVRQGGGHPL DLHLSPTCSM HDSRTLIVDN 120 NSDGRRPMTV ATDVPTKGLS SASVNRQQEV AMKDIGAAAA DSVQGGVPGG MTAAKSPPVM 180 ERIIARMSSM RATGHGERGG VGNVGCEEEG EVDGADEEES DSDDEEEDGV KEVTARGGKK 240 KADNGRGKGK SKKGGEGGGG NRRGLWDLNE SLILVRCKRN QDYLANVGSN FAQMKTKEWK 300 WTDISNQMRQ QGVMRDWDSC MKRWENVIGH YKKVLEREES GVQSFFTLTV RQRKDLGYKF 360 TMDRMLNDAI DGMHTDVVVT LRGRIAGRTV LFYEMRHHRD KDCGRAFEFV NTVTRHEVRH 420 FEVDENGCTC LRFTAGYGFD RGLLTHVVAF ATKARDAIPD RWDFVIDVLA NLVNLLVSNV 480 AMEFDDRLDE AAAYRVHVDP PLYGREYLHG EIGIVVDGFQ

Sequence ? help Back to Top

Protein Sequence Length: 520 aa Download sequence

MGESRLGAGR EHGMERAGFT SGTDMREHRF DPALYSHLPS CKQPLPDDNH WEPPPSTLPL  60
GWGSTQTSYN MVGIPHRRAR SLGPMSTLLD EVRQGGGHPL DLHLSPTCSM HDSRTLIVDN  120
NSDGRRPMTV ATDVPTKGLS SASVNRQQEV AMKDIGAAAA DSVQGGVPGG MTAAKSPPVM  180
ERIIARMSSM RATGHGERGG VGNVGCEEEG EVDGADEEES DSDDEEEDGV KEVTARGGKK  240
KADNGRGKGK SKKGGEGGGG NRRGLWDLNE SLILVRCKRN QDYLANVGSN FAQMKTKEWK  300
WTDISNQMRQ QGVMRDWDSC MKRWENVIGH YKKVLEREES GVQSFFTLTV RQRKDLGYKF  360
TMDRMLNDAI DGMHTDVVVT LRGRIAGRTV LFYEMRHHRD KDCGRAFEFV NTVTRHEVRH  420
FEVDENGCTC LRFTAGYGFD RGLLTHVVAF ATKARDAIPD RWDFVIDVLA NLVNLLVSNV  480
AMEFDDRLDE AAAYRVHVDP PLYGREYLHG EIGIVVDGFQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	2e-06	Trihelix family protein