PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG75991.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 549aa MW: 57954.9 Da PI: 5.0604

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG75991.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	35.5	2.6e-11	283	367	1	80
trihelix 1 rWtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcp 80 +W+++e+ aLi+a + e+++++ + k++W++v++ ++++gf+r+ + C+ + +nl++ +++i +++++ s+++s ++ GBG75991.1 283 CWSDDETVALIRAHGdllcgkdLTSENMGNALSGKKKWQAVAAILASKGFTREWNDCQTRHKNLAGWHRRIGDNDRR--SGQQSYWR 367 7************7777765556666677799*************************************9998..56666675 PP

Sequence ? help Back to Top
Protein Sequence Length: 549 aa Download sequence
MEKEGRSVQL TESAIRLCSD DGSAELEAFR ESLRRQAMQR DSQGAVAVPE GHQSSTDSEE 60 PSTGNASAEG PQPPHPVVMV DSTTQQSAGS PHHTPSIFGL DAGHDFAEHP PANRYPAHLV 120 TAFGGHAQLH GHSSSTTDNS GVSEEVHLCG SPTMLVNGNG SSSCEEDDCA YVGEANAAYT 180 FSEEFNTDIE ENGSGQGSDS TGGSAQDINA ATSIDVIVRA GGDAHGGGDD GGDDSGDEGS 240 DEGAASGGEG GGNGSVGGGG DSGDSPGLSP GEKTRTGKRK RNCWSDDETV ALIRAHGDLL 300 CGKDLTSENM GNALSGKKKW QAVAAILASK GFTREWNDCQ TRHKNLAGWH RRIGDNDRRS 360 GQQSYWRMTP TERCAENLGF YMRRAWFDLF NVYNANNPAI HAEHVHDPGT EQENAASASP 420 PPASQESTPG VTTAAADQLP DYTPASSKKR RGSLNAREKS MKGVAAMMGE HTATITRQGE 480 KKCRLSSECT DKTVAAMDRQ TKVAREEIKA RINCVEKQIE SMERGWALIA DAIKALAAAR 540 APEGRGRAS

Sequence ? help Back to Top

Protein Sequence Length: 549 aa Download sequence

MEKEGRSVQL TESAIRLCSD DGSAELEAFR ESLRRQAMQR DSQGAVAVPE GHQSSTDSEE  60
PSTGNASAEG PQPPHPVVMV DSTTQQSAGS PHHTPSIFGL DAGHDFAEHP PANRYPAHLV  120
TAFGGHAQLH GHSSSTTDNS GVSEEVHLCG SPTMLVNGNG SSSCEEDDCA YVGEANAAYT  180
FSEEFNTDIE ENGSGQGSDS TGGSAQDINA ATSIDVIVRA GGDAHGGGDD GGDDSGDEGS  240
DEGAASGGEG GGNGSVGGGG DSGDSPGLSP GEKTRTGKRK RNCWSDDETV ALIRAHGDLL  300
CGKDLTSENM GNALSGKKKW QAVAAILASK GFTREWNDCQ TRHKNLAGWH RRIGDNDRRS  360
GQQSYWRMTP TERCAENLGF YMRRAWFDLF NVYNANNPAI HAEHVHDPGT EQENAASASP  420
PPASQESTPG VTTAAADQLP DYTPASSKKR RGSLNAREKS MKGVAAMMGE HTATITRQGE  480
KKCRLSSECT DKTVAAMDRQ TKVAREEIKA RINCVEKQIE SMERGWALIA DAIKALAAAR  540
APEGRGRAS