PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG75957.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 497aa MW: 51810.1 Da PI: 7.7243

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG75957.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	26	2.4e-08	210	250	19	59
trihelix 19 erlrrgklkkplWeevskkmrergferspkqCkekwenlnk 59 + + + k ++++ e+++++++e+g++r+++ C++kw +l+ GBG75957.1 210 NGVHKHKTRAKRYEWIADRLKEEGYNRTAEDCRKKWTKLKE 250 455667899*****************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 497 aa Download sequence
MEGRRFTSEL MGEYDNTMDS DRSGVEDIAG TQMDRGGGPR RSSPGGRMEN VVMADHTERQ 60 SHVPANAYPQ PQTMHAQVQG AVPARLSEGG FMHAGGGERT AFAVEGWHGE TTAMQFGDEA 120 VAFSTPSRSG GPAGNVTGKR TADNAVGEGS VMRGDVGRSA EDTASGQKKQ RARRAPRAEG 180 GKKNNPWTLE ERIALARNCA EDYALMADTN GVHKHKTRAK RYEWIADRLK EEGYNRTAED 240 CRKKWTKLKE IVSQIRDKCY RSGEAGYFNM TTEQRREKDV CTTFEEPLWD AMEWWRLKKS 300 YTCDATLASE DLAGGGGSGS GRSGGGSDGG EGGGGNLSGQ GQGGTGPGLA GGGSRSGEIG 360 GGIKIGEGGI GGGSTRGGGV ASDGGGTDAS DMSGRPCRTS LGRVRGDAPT SSSLTKTAME 420 DSAKTLCKGL NKASRTLACA TCEGATMMST KIGNVAVQVG AVAGAMHEGN AVLQSLVAVI 480 AARSSNSTLG RGENDPS

Sequence ? help Back to Top

Protein Sequence Length: 497 aa Download sequence

MEGRRFTSEL MGEYDNTMDS DRSGVEDIAG TQMDRGGGPR RSSPGGRMEN VVMADHTERQ  60
SHVPANAYPQ PQTMHAQVQG AVPARLSEGG FMHAGGGERT AFAVEGWHGE TTAMQFGDEA  120
VAFSTPSRSG GPAGNVTGKR TADNAVGEGS VMRGDVGRSA EDTASGQKKQ RARRAPRAEG  180
GKKNNPWTLE ERIALARNCA EDYALMADTN GVHKHKTRAK RYEWIADRLK EEGYNRTAED  240
CRKKWTKLKE IVSQIRDKCY RSGEAGYFNM TTEQRREKDV CTTFEEPLWD AMEWWRLKKS  300
YTCDATLASE DLAGGGGSGS GRSGGGSDGG EGGGGNLSGQ GQGGTGPGLA GGGSRSGEIG  360
GGIKIGEGGI GGGSTRGGGV ASDGGGTDAS DMSGRPCRTS LGRVRGDAPT SSSLTKTAME  420
DSAKTLCKGL NKASRTLACA TCEGATMMST KIGNVAVQVG AVAGAMHEGN AVLQSLVAVI  480
AARSSNSTLG RGENDPS