PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG75946.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 326aa    MW: 34696.2 Da    PI: 5.2106
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG75946.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix37.85.1e-12146217165
    trihelix   1 rWtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkik 65 
                 rW + e laLi+a            e+++++++  ++We +s+++ + gf r+   C+++w+nl k y+k+ 
  GBG75946.1 146 RWNDAEMLALIRAHGeykvaraVNSEAIGNACSLNKKWEGISIVVCAAGFIRNGYDCENRWKNLWKWYRKVL 217
                 8************9966555555555566679*************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MPQWSTEQLQ EQPLLSPQSS VGGVGGVDMS QLGVGVSQLE SQVVCDMPQR SLLSAFDEAL  60
QQTSHSLPTA GLGPSGTVVL SDQELGVGSV DWAGDCGNGL PHQMGGGDDD YADSQAGADS  120
QAGGDRGHHE TEVPGNGGDG CHRNRRWNDA EMLALIRAHG EYKVARAVNS EAIGNACSLN  180
KKWEGISIVV CAAGFIRNGY DCENRWKNLW KWYRKVLVHD GMSGVQSYWT TSPEARANAG  240
LTFRLRRSWF DLIDSFNIRN PAVHPEGVVD PGNEEDGRGP GQGSRGSPPV SGGRAESGVA  300
NACAEGAEVG TSAKRRRSVA NARERL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47660.18e-06Trihelix family protein