PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG75648.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 480aa MW: 53429.1 Da PI: 7.1798

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG75648.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	37.2	7.5e-12	137	212	2	70
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 W + aL++a+r m+ ++ r k ++ +We+v ++++ g++r+ + C++kw+nl +++kk+ + ++ GBG75648.1 137 WLVGDTIALVRAKRdqnlyivGMGPSFARMKTREWKWEDVRARLQTMGITREGVDCRKKWDNLMQQFKKVHKFQNL 212 666778899999999999999999*********************************************9987765 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
MHLSPASRRG SGIPRGRQRT EDSCEGGADV QHDGRQLWAE CRQALNQGGT KTITRGVQRL 60 YVDEGDEAAF EEALSCDDVD GDDDCNSYDL SDIKPLGRKV ANGGTSAKRG PAPKNRRNKK 120 MDDDTGRSDG EGSRNFWLVG DTIALVRAKR DQNLYIVGMG PSFARMKTRE WKWEDVRARL 180 QTMGITREGV DCRKKWDNLM QQFKKVHKFQ NLSDGKDYFK LASKARRSEG FNFVMDRSVY 240 DEMEAMTKGD HTIYLKNLAD TGAAEGVQMP AGDGVGGETM ASEGGGEAAD EEQGSTKDST 300 LNTGSDGGYG KRKNMWQQTF EVVADVMDKH GALMASTMDS ASKWQCSMML RQCEILESEV 360 EVQRKHYAAA DEANRLMCNA MMKIAKAIHE RSCGGGYGKR KNMWPQTFEV VADVMDKHGA 420 LMASTMDSAS KRQCSMMLRQ CEILESEVEV QRKHYAAADE ANRLMCNALM KIAKAIRERS

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

MHLSPASRRG SGIPRGRQRT EDSCEGGADV QHDGRQLWAE CRQALNQGGT KTITRGVQRL  60
YVDEGDEAAF EEALSCDDVD GDDDCNSYDL SDIKPLGRKV ANGGTSAKRG PAPKNRRNKK  120
MDDDTGRSDG EGSRNFWLVG DTIALVRAKR DQNLYIVGMG PSFARMKTRE WKWEDVRARL  180
QTMGITREGV DCRKKWDNLM QQFKKVHKFQ NLSDGKDYFK LASKARRSEG FNFVMDRSVY  240
DEMEAMTKGD HTIYLKNLAD TGAAEGVQMP AGDGVGGETM ASEGGGEAAD EEQGSTKDST  300
LNTGSDGGYG KRKNMWQQTF EVVADVMDKH GALMASTMDS ASKWQCSMML RQCEILESEV  360
EVQRKHYAAA DEANRLMCNA MMKIAKAIHE RSCGGGYGKR KNMWPQTFEV VADVMDKHGA  420
LMASTMDSAS KRQCSMMLRQ CEILESEVEV QRKHYAAADE ANRLMCNALM KIAKAIRERS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	1e-06	Trihelix family protein