PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG75567.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 632aa MW: 70334 Da PI: 4.3996

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG75567.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	31.7	4e-10	44	113	5	67
trihelix 5 qevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikeg 67 ++ aLi+a+r+ + +l+++ +++ +W +v +++ + g+ r + +C +kw+nl +++kki + GBG75567.1 44 DHMVALIRAKRDQDAQLQAAGhalarmrSREWKWLDVRERLLKVGVDRPADKCGKKWDNLMQQFKKIHTF 113 56789**********9753334444499**********************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 632 aa Download sequence
MGGRGGRGRA STNAGRRRKR PSATSADAEG EGDGEGGRNF RSVDHMVALI RAKRDQDAQL 60 QAAGHALARM RSREWKWLDV RERLLKVGVD RPADKCGKKW DNLMQQFKKI HTFMGMSGKE 120 DFFQLTSQQR AEXNLMQQFK KIHTFMGMSG KEDFFQLTSQ QRAEKGFSFN MDRAVYEEIK 180 GVKERSHTIS PSNVADTGGA GAVGAVVGTS TKGTGEGGGD GRDTADDDDP LINRQRRSGN 240 MAALEAKAKL WVDDLCFWNE TEGHAMFKLI QETRLHLIAI AKGVKPPEIR KSVVLPNTTI 300 PQQKLEDSSE LGAAKERASR VQTIALCIIH GWIFKSPNRA RGYHCSYGYV LNHVATDLAR 360 SIWFGEEWRV CLSSAVVHNT LELHMKLPIW YVGGVIHDRH EDDEMASYQK STTQRLVGAF 420 TNVVDTGEGV DGGRISYERL RNVADCMRLL LSAAMWIMRM TGDNLRLHYE ASHLVELIAK 480 PTLIASLHRS FDARGHVLQC VNAVTEKMGK PPMTLVDPPV YIPDLALWTT TEKMGKPPAV 540 AADDDDDVDN EDVDDDDDNG DDDDDDGDND DDDDGNNDDD EFDVHDDADD RDVDDRDDDG 600 DDDDGDDDDG DDDDGDDDDD DDDEDDDDDV QD

Sequence ? help Back to Top

Protein Sequence Length: 632 aa Download sequence

MGGRGGRGRA STNAGRRRKR PSATSADAEG EGDGEGGRNF RSVDHMVALI RAKRDQDAQL  60
QAAGHALARM RSREWKWLDV RERLLKVGVD RPADKCGKKW DNLMQQFKKI HTFMGMSGKE  120
DFFQLTSQQR AEXNLMQQFK KIHTFMGMSG KEDFFQLTSQ QRAEKGFSFN MDRAVYEEIK  180
GVKERSHTIS PSNVADTGGA GAVGAVVGTS TKGTGEGGGD GRDTADDDDP LINRQRRSGN  240
MAALEAKAKL WVDDLCFWNE TEGHAMFKLI QETRLHLIAI AKGVKPPEIR KSVVLPNTTI  300
PQQKLEDSSE LGAAKERASR VQTIALCIIH GWIFKSPNRA RGYHCSYGYV LNHVATDLAR  360
SIWFGEEWRV CLSSAVVHNT LELHMKLPIW YVGGVIHDRH EDDEMASYQK STTQRLVGAF  420
TNVVDTGEGV DGGRISYERL RNVADCMRLL LSAAMWIMRM TGDNLRLHYE ASHLVELIAK  480
PTLIASLHRS FDARGHVLQC VNAVTEKMGK PPMTLVDPPV YIPDLALWTT TEKMGKPPAV  540
AADDDDDVDN EDVDDDDDNG DDDDDDGDND DDDDGNNDDD EFDVHDDADD RDVDDRDDDG  600
DDDDGDDDDG DDDDGDDDDD DDDEDDDDDV QD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	8e-06	Trihelix family protein