PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG75407.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 534aa MW: 56828.6 Da PI: 7.9456

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG75407.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	26.8	1.3e-08	299	373	2	70
trihelix 2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 Wt +e +L ++ e++ + +++ ++ + ++++++m+e f r+ + C++kw +l+k+ ++i++ + GBG75407.1 299 WTLEERVLLAKISGEDDALMADAEgvhslmTRGRRYDWIADRMKENAFARTGEDCRKKWTELQKKVREIRDACDG 373 8888888888888888888888766677779999*******************************9999997665 PP

Sequence ? help Back to Top
Protein Sequence Length: 534 aa Download sequence
MDGGSFTSQL YSESGGSQGV EVCEDMNVHL ESNRYRASLS ATTWQYVPDS QLSGDTRSQF 60 VARAADPRAA YIVGSMDSSS SFGRGTYPPQ SQPRGTQPSI GGTAFHSPQP YAGRGGSSRT 120 NAGAWGSNPQ QSSQPSSHRP QCMPPLAQPV VSRGVVGGGE TFVNGRSSPV DQGYRQQTPM 180 GPGTIRYDDG GATAPTPGGG DRQRGSASRG VHTPPSGNCR SRDGERLSFS HPTVGVDSVP 240 SERQGRNVSN TGGTQDTSAR SRECSVEDDG SGRPPKEGGA GERKKGGKST TVPKKNTLWT 300 LEERVLLAKI SGEDDALMAD AEGVHSLMTR GRRYDWIADR MKENAFARTG EDCRKKWTEL 360 QKKVREIRDA CDGSDKQPYW DLTTEARKKL NIPMTFERPL WDAMEWYRLK AAFTMDNTMA 420 SEELRGMGSA TASEAGSEGG GTETSGGAPK TRRTDSGKVC GSDVGQGVSA MAVAMEDTSR 480 RLCKGLDTAV GTLASATTEG AALMAARLGD MATEIGHVAG AMRQGTPFWS CSWV

Sequence ? help Back to Top

Protein Sequence Length: 534 aa Download sequence

MDGGSFTSQL YSESGGSQGV EVCEDMNVHL ESNRYRASLS ATTWQYVPDS QLSGDTRSQF  60
VARAADPRAA YIVGSMDSSS SFGRGTYPPQ SQPRGTQPSI GGTAFHSPQP YAGRGGSSRT  120
NAGAWGSNPQ QSSQPSSHRP QCMPPLAQPV VSRGVVGGGE TFVNGRSSPV DQGYRQQTPM  180
GPGTIRYDDG GATAPTPGGG DRQRGSASRG VHTPPSGNCR SRDGERLSFS HPTVGVDSVP  240
SERQGRNVSN TGGTQDTSAR SRECSVEDDG SGRPPKEGGA GERKKGGKST TVPKKNTLWT  300
LEERVLLAKI SGEDDALMAD AEGVHSLMTR GRRYDWIADR MKENAFARTG EDCRKKWTEL  360
QKKVREIRDA CDGSDKQPYW DLTTEARKKL NIPMTFERPL WDAMEWYRLK AAFTMDNTMA  420
SEELRGMGSA TASEAGSEGG GTETSGGAPK TRRTDSGKVC GSDVGQGVSA MAVAMEDTSR  480
RLCKGLDTAV GTLASATTEG AALMAARLGD MATEIGHVAG AMRQGTPFWS CSWV