PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG75226.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 704aa MW: 76048.8 Da PI: 7.6703

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG75226.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	32.7	1.9e-10	274	344	2	65
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkik 65 W+ +e ++L++ +r ++++++r + k+ +W +++k+m+ +g +++ C +kw+nl + ykki+ GBG75226.1 274 WSTDEQKLLVRCKReqemhlvGLGHNYGRMRTKEWKWIDIAKRMANGGSPKKADNCMKKWDNLFQNYKKIQ 344 9***********55555555555666889************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 704 aa Download sequence
MAGMKARAIL PAAEGGRRLA TTEPSRWYDP SMCSHLPSWE TPLPPSDEEP EGDEFPTFPL 60 ASGSTQLLSQ MVLVGGEASR TVITAAHASA RGLQQPRREQ MGPSTVRGGA SVVGGVGSSP 120 AARQHVSGAP SGERFMDNWD VRTAAATSSL RTSGARSSML NRTTAAPPEG RDKGARKPPA 180 GSGARVEKIT RGVSNMRAHS DGGDDDGCGG DDANDGLREE VEAGDDDDDN AVWPVGKTGG 240 RGIGCSNRGG RGRSVGRGGR GGVTDDGGKS GTYWSTDEQK LLVRCKREQE MHLVGLGHNY 300 GRMRTKEWKW IDIAKRMANG GSPKKADNCM KKWDNLFQNY KKIQSPDGVQ LPRRGAGGEE 360 SVDSEGGGDG CPEERSSARD PNVNACSVAR GGKRKNACQQ ALESIADVMD RHGKPMSSTI 420 ESSSKRALKR MLPLAPEAQQ ARGRDARKDK AVVVVAEGDD NETLERRRQR NLAQDSAAPL 480 MTTRLPERKS CQSDTQSRAR RQVLRAGPPH APICGHTIDL NMDLPLWFAG AHINDRPDDD 540 DMAVYQESTV ICIAQAFRAA VQMGAHIDSD FISYDHLCRV GDCFRLLLAA AMWIMRMAGD 600 DFRSHYEAFY SVNLLARPTL VASMHRSFDH RRSIVRAAKA VTERLGKANP TFGEHPNYIP 660 QWAPCGITFG HDASVTGPED CKRLDWLGSG PPDDDGDDDK KEGA

Sequence ? help Back to Top

Protein Sequence Length: 704 aa Download sequence

MAGMKARAIL PAAEGGRRLA TTEPSRWYDP SMCSHLPSWE TPLPPSDEEP EGDEFPTFPL  60
ASGSTQLLSQ MVLVGGEASR TVITAAHASA RGLQQPRREQ MGPSTVRGGA SVVGGVGSSP  120
AARQHVSGAP SGERFMDNWD VRTAAATSSL RTSGARSSML NRTTAAPPEG RDKGARKPPA  180
GSGARVEKIT RGVSNMRAHS DGGDDDGCGG DDANDGLREE VEAGDDDDDN AVWPVGKTGG  240
RGIGCSNRGG RGRSVGRGGR GGVTDDGGKS GTYWSTDEQK LLVRCKREQE MHLVGLGHNY  300
GRMRTKEWKW IDIAKRMANG GSPKKADNCM KKWDNLFQNY KKIQSPDGVQ LPRRGAGGEE  360
SVDSEGGGDG CPEERSSARD PNVNACSVAR GGKRKNACQQ ALESIADVMD RHGKPMSSTI  420
ESSSKRALKR MLPLAPEAQQ ARGRDARKDK AVVVVAEGDD NETLERRRQR NLAQDSAAPL  480
MTTRLPERKS CQSDTQSRAR RQVLRAGPPH APICGHTIDL NMDLPLWFAG AHINDRPDDD  540
DMAVYQESTV ICIAQAFRAA VQMGAHIDSD FISYDHLCRV GDCFRLLLAA AMWIMRMAGD  600
DFRSHYEAFY SVNLLARPTL VASMHRSFDH RRSIVRAAKA VTERLGKANP TFGEHPNYIP  660
QWAPCGITFG HDASVTGPED CKRLDWLGSG PPDDDGDDDK KEGA