PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GBG74769.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
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Family | Trihelix | ||||||||
Protein Properties | Length: 651aa MW: 71998.9 Da PI: 8.4715 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 31.6 | 4.3e-10 | 88 | 162 | 2 | 69 |
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 W+ + aL++a+r ++++l r k ++ +We v ++++ g++r+++ C +kw+nl +++kk+ + ++ GBG74769.1 88 WSVGDTIALVRAKRdqdlyivGLGHSLARMKTREWKWEGVRARLQTMGVTRKAIDCGKKWDNLMQQFKKVHKFQN 162 88889999999999888888888899999****************************************987665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 651 aa Download sequence |
MKTITRGVQR LHVDEGNDTA VQEPLDCDDA DGDEDCNFDN LPEIRPLRSK VRNGGASAKK 60 CPTPRNRRNK KMDEDTGKSD GEGDRNFWSV GDTIALVRAK RDQDLYIVGL GHSLARMKTR 120 EWKWEGVRAR LQTMGVTRKA IDCGKKWDNL MQQFKKVHKF QNLSGGKYYF KLASSARRSE 180 GNNFVMDRSV YDDMEAVTKG DHTIQTRGRR GGFRCRQARG LEGNPWPGRE RGCRHVPKAR 240 RFRSEEASGS VPPRRAQTWA IADEGDDDDV VATKEEALED TVSALRGRGR QRSSDQSIAR 300 RLVTPPSETQ HVSACDTAKA KEVVDVGSED DEPLESRRQR NVTRGATTTV VRARGATEER 360 PPQGGLPSTP SQQHPRNTTD EGGSMERGGG GEIQQEVRVV VGGPIAVPGA GTSSTVAPVA 420 RVGEELLVVE REVARGEKKA GDLPCDGGGE YCSARLARLG LQVRECPPGY NLALQYSLES 480 VATDIARAMW YGEEWSNIVS AAVCMRTIDL SMDLTLWFAG ANIEDRPKDD DMAAYQESTV 540 ICITHAFRAA VQMGANVDGG LISHDRLSRV ADCFKLLLAA SMRLMRMAGD DLRSHYEAFY 600 FTKLVAKPTL VPSMHRSFEH RRSVIRATNV VTERLGKANA TLGEHPKYIP N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35640.1 | 5e-07 | Trihelix family protein |