PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG74769.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 651aa    MW: 71998.9 Da    PI: 8.4715
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG74769.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix31.64.3e-1088162269
    trihelix   2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 
                 W+   + aL++a+r        ++++l r k ++ +We v ++++  g++r+++ C +kw+nl +++kk+ + ++
  GBG74769.1  88 WSVGDTIALVRAKRdqdlyivGLGHSLARMKTREWKWEGVRARLQTMGVTRKAIDCGKKWDNLMQQFKKVHKFQN 162
                 88889999999999888888888899999****************************************987665 PP

Sequence ? help Back to Top
Protein Sequence    Length: 651 aa     Download sequence    
MKTITRGVQR LHVDEGNDTA VQEPLDCDDA DGDEDCNFDN LPEIRPLRSK VRNGGASAKK  60
CPTPRNRRNK KMDEDTGKSD GEGDRNFWSV GDTIALVRAK RDQDLYIVGL GHSLARMKTR  120
EWKWEGVRAR LQTMGVTRKA IDCGKKWDNL MQQFKKVHKF QNLSGGKYYF KLASSARRSE  180
GNNFVMDRSV YDDMEAVTKG DHTIQTRGRR GGFRCRQARG LEGNPWPGRE RGCRHVPKAR  240
RFRSEEASGS VPPRRAQTWA IADEGDDDDV VATKEEALED TVSALRGRGR QRSSDQSIAR  300
RLVTPPSETQ HVSACDTAKA KEVVDVGSED DEPLESRRQR NVTRGATTTV VRARGATEER  360
PPQGGLPSTP SQQHPRNTTD EGGSMERGGG GEIQQEVRVV VGGPIAVPGA GTSSTVAPVA  420
RVGEELLVVE REVARGEKKA GDLPCDGGGE YCSARLARLG LQVRECPPGY NLALQYSLES  480
VATDIARAMW YGEEWSNIVS AAVCMRTIDL SMDLTLWFAG ANIEDRPKDD DMAAYQESTV  540
ICITHAFRAA VQMGANVDGG LISHDRLSRV ADCFKLLLAA SMRLMRMAGD DLRSHYEAFY  600
FTKLVAKPTL VPSMHRSFEH RRSVIRATNV VTERLGKANA TLGEHPKYIP N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.15e-07Trihelix family protein