PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG74638.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 953aa MW: 102541 Da PI: 7.0165

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG74638.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	30.4	1e-09	301	375	2	69
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 W+ +e l+L++ +re e +l r + k +W++++k+m++ + + C +kw+nl + ykki++ ++ GBG74638.1 301 WSPEEQLQLVRCKREQEMHLAglghnygRMRTKDWKWDDIAKRMASAAKPKDADDCMKKWDNLFQNYKKIQQFQN 375 9***********66666653333333778*************************************98665 PP

Sequence ? help Back to Top
Protein Sequence Length: 953 aa Download sequence
MQGRAGVGAG QGGIRPATTE PPRRYDPSMY AHLQSWEMPL PPSDEEPEPK ELPTLPLASG 60 STQLWSQTAR AGGSGCNEGG EYTSLLQQGL GDDDDGGLDL RFSLCSGGSK ETSRTLIIDT 120 DPSPCGVGQG GSQRTDQTTL RARASVAASA GPSAVLRRQG STAPSADRST SNWLARNGAA 180 AGSPRVECAR PSMPERTTPT QSDVRDAGAC RPPVRPVPTV ENITRGVSNM RAHSDGGDDA 240 DERLTEDVDA GDEDEDIPVR PLGKTGGRGR ARSRGAVRGR SVGRGGRGCV SDDAGKSVTY 300 WSPEEQLQLV RCKREQEMHL AGLGHNYGRM RTKDWKWDDI AKRMASAAKP KDADDCMKKW 360 DNLFQNYKKI QQFQNASGRP DFFGLTNEER KEHNFKFRME SALYNEIHAG MLGNHTIFPP 420 NIADTGNPDG VQLPRRGGGG GESVGSEAGG EGFPEERSYA RELFTPGRGS RRPSAVHADV 480 ARQSSRHGAS SSTIFSLVTD EDQGQATASG VRESGGLRQS DHSASKRLMT PPPETKQVRA 540 RDKWTNDAHV DDVGDDDDEP LERRLLRSHT AAIPPPTASG HALAGEKAVT GRLPATTAAP 600 RPRNTTAEGG SVQRGGGGVV AAHAGAVGVE AAGAAGAVAG VSGSAPPVPA AREEGAVVAM 660 ARDDARGEKR SDREGDEAGS SRPRRGVLTN DLIDRAVLWV DNKPFWTTGE GRRLYNIVHE 720 TREDFVAIAG GLPPPAIPRS VVMPKSSTRI ARIADPSQLQ QATSRASTVE NIALRVLHGW 780 VFKSANRPRG YNLAFQYALE SMATDIARAM WYGEEWCNIV SPAVCAHTID LSMDLPLWFA 840 GMKVENRPDD DDMAAYQEST IICVAHAFRA ALQMGAVIDG EFISHDRLCR VVDCFGLLLA 900 ACMWIMRMSG DDPRSHFEVF HFATLVSKPT LVASMHRSFD HRRYIRLAVK AVT

Sequence ? help Back to Top

Protein Sequence Length: 953 aa Download sequence

MQGRAGVGAG QGGIRPATTE PPRRYDPSMY AHLQSWEMPL PPSDEEPEPK ELPTLPLASG  60
STQLWSQTAR AGGSGCNEGG EYTSLLQQGL GDDDDGGLDL RFSLCSGGSK ETSRTLIIDT  120
DPSPCGVGQG GSQRTDQTTL RARASVAASA GPSAVLRRQG STAPSADRST SNWLARNGAA  180
AGSPRVECAR PSMPERTTPT QSDVRDAGAC RPPVRPVPTV ENITRGVSNM RAHSDGGDDA  240
DERLTEDVDA GDEDEDIPVR PLGKTGGRGR ARSRGAVRGR SVGRGGRGCV SDDAGKSVTY  300
WSPEEQLQLV RCKREQEMHL AGLGHNYGRM RTKDWKWDDI AKRMASAAKP KDADDCMKKW  360
DNLFQNYKKI QQFQNASGRP DFFGLTNEER KEHNFKFRME SALYNEIHAG MLGNHTIFPP  420
NIADTGNPDG VQLPRRGGGG GESVGSEAGG EGFPEERSYA RELFTPGRGS RRPSAVHADV  480
ARQSSRHGAS SSTIFSLVTD EDQGQATASG VRESGGLRQS DHSASKRLMT PPPETKQVRA  540
RDKWTNDAHV DDVGDDDDEP LERRLLRSHT AAIPPPTASG HALAGEKAVT GRLPATTAAP  600
RPRNTTAEGG SVQRGGGGVV AAHAGAVGVE AAGAAGAVAG VSGSAPPVPA AREEGAVVAM  660
ARDDARGEKR SDREGDEAGS SRPRRGVLTN DLIDRAVLWV DNKPFWTTGE GRRLYNIVHE  720
TREDFVAIAG GLPPPAIPRS VVMPKSSTRI ARIADPSQLQ QATSRASTVE NIALRVLHGW  780
VFKSANRPRG YNLAFQYALE SMATDIARAM WYGEEWCNIV SPAVCAHTID LSMDLPLWFA  840
GMKVENRPDD DDMAAYQEST IICVAHAFRA ALQMGAVIDG EFISHDRLCR VVDCFGLLLA  900
ACMWIMRMSG DDPRSHFEVF HFATLVSKPT LVASMHRSFD HRRYIRLAVK AVT