PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG73937.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 303aa    MW: 33106.6 Da    PI: 6.4047
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG73937.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix31.93.3e-1083159270
    trihelix   2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekk 70 
                 Wt ++  aL++a++        ++++++r k++  +W++v k++ + g+ +r+ ++C++kw+nl +++k + + +++
  GBG73937.1  83 WTVDHMIALVRAKSdqdlhpvGLGHNYGRMKSRTWKWDDVEKRLVKVGVtTRKVEECRKKWDNLYQQFKSVHKFMGQ 159
                 9*************8888888888999999**************99999789******************9987776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MNVRGQDMLM DCDGGGGEDC TADDDDNDNG EDDDGEMEIR SLGRKRGGTR ATNKSTEPRA  60
GRKCKKVVDD TSTGDGGKSR DFWTVDHMIA LVRAKSDQDL HPVGLGHNYG RMKSRTWKWD  120
DVEKRLVKVG VTTRKVEECR KKWDNLYQQF KSVHKFMGQS GTQNFFTLTP TERKEKGSDF  180
QMDEHVYSEM NAMSKADHTI GPTNLADTGA AGGVQMAGPG GGLNESVASE GCGGRQDNDQ  240
GSTRDSTFSG GSAGGGGKRK NVRQQTFDAI SDIMDKHGKL MVTVDSASKR QCSVLTRQCD  300
ILE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.15e-06Trihelix family protein