PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG73930.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 419aa    MW: 45997.3 Da    PI: 7.9034
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG73930.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix44.15.5e-14140207169
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 
                 rW + e+  L ++r++m+   + ++lk+  W++v ++mr++g++r+p qCk+k++++  +y+++k++e+
  GBG73930.1 140 RWGETETEWLCRFRNDMKAL-GCTRLKACFWKDVVERMRAKGYNRNPDQCKNKFNQILDYYRRLKAHES 207
                 8***************9865.5566****************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    
MGCRSSPPPA ALSLTGHTSR PLSLDPFRGA GLPHPPRPRT GSPEYVMSRI IRDKEAGVPP  60
VDCPANTAVG GEVVASPTAP ARTPPQRGSF EGGGTPSPLI GHSASQHTPR TVENLAGTST  120
AGPSEGPPPR PCSTEKNTDR WGETETEWLC RFRNDMKALG CTRLKACFWK DVVERMRAKG  180
YNRNPDQCKN KFNQILDYYR RLKAHESWSG LLSYWDMNQT RRKKYNVSFV LRRAWYDIIH  240
PVEKDKDSIN LTNLMDSGVD EEHLEDSERC NEVDGETEGG SEGPAGGSDS SPGGPDSSPS  300
GQHSTGFDPM LGKRKRTAIN ARESSLQAVI GAMRDHTAAL ACSDRECVKM RCEVTRDIAR  360
HQAEVHRELM QQDIASRERI ATITGDRLEK GYLVLADAIH SLRPRRNSPS SGPDSSDSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76890.22e-08Trihelix family protein