PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG73469.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 599aa MW: 64879.1 Da PI: 10.3826

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG73469.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	38.9	2.2e-12	418	491	2	68
trihelix 2 WtkqevlaLiearremeerlrrg.......klkkplWeevskkmrergferspkqCkekwenlnkrykkikege 68 W+ +++ aLi+a+r+ + +l+ k ++ +W + +k++ g+ r+p++C +kw+nl +++kk+ + + GBG73469.1 418 WSVEHIIALIRAKRDQDAHLQGMghaytwmKPREWKWNDLPRKLKNVGVDRKPEKCGKKWDNLMQQFKKVHHFQ 491 9***********9999999632333344799**********************************98765 PP

Sequence ? help Back to Top
Protein Sequence Length: 599 aa Download sequence
MSTPTVTVSG PVASPRCTPR CNLGLGFSRG GKPANGRQMR IFEAAQRVHK TTASVCRQAR 60 VAVCRASQLR CRPCSLPSSA VAVVRCMDDI FRKLPLLLLA VFLLVVVVVL HVCFVGNAPW 120 RRHRQTSPMK AVRTDSGQGS PRGGGEQVVS RRAVGSSSLA SRLSLGVGNS SLPPHLQPLP 180 DSSDEEEREG RTRTLPLGSG STQEWSWTEL CGGSGGVHGQ SFTELLAPGL DGEEGHGGSN 240 LSSGLSTGRR AAVAGTSDFH LQEHVRSSVV YAVPGSGVCC VQPGTSTWHC RGGGGYLDDV 300 VDDRDGRLVW AEERRKIREG REEAIRRGVE RLRMDRQAEE VEKPHAGLPS EDDDDDDAGE 360 AGDGNDGYAS PSQNSDRGGK GGKTKATSGN GRGRPKKARA KANDGEGDGD AEEKRNFWSV 420 EHIIALIRAK RDQDAHLQGM GHAYTWMKPR EWKWNDLPRK LKNVGVDRKP EKCGKKWDNL 480 MQQFKKVHHF QSSSGGIDFF QLNGKKRARP ASISTWTAPF TTRLKGPAVS TKPSTPKTLP 540 KLVPAAVCVS HRRQLLILKQ LVMPTPVRGG EDENEGSTRG SSQTPSSPHG FGKRKSTRQ

Sequence ? help Back to Top

Protein Sequence Length: 599 aa Download sequence

MSTPTVTVSG PVASPRCTPR CNLGLGFSRG GKPANGRQMR IFEAAQRVHK TTASVCRQAR  60
VAVCRASQLR CRPCSLPSSA VAVVRCMDDI FRKLPLLLLA VFLLVVVVVL HVCFVGNAPW  120
RRHRQTSPMK AVRTDSGQGS PRGGGEQVVS RRAVGSSSLA SRLSLGVGNS SLPPHLQPLP  180
DSSDEEEREG RTRTLPLGSG STQEWSWTEL CGGSGGVHGQ SFTELLAPGL DGEEGHGGSN  240
LSSGLSTGRR AAVAGTSDFH LQEHVRSSVV YAVPGSGVCC VQPGTSTWHC RGGGGYLDDV  300
VDDRDGRLVW AEERRKIREG REEAIRRGVE RLRMDRQAEE VEKPHAGLPS EDDDDDDAGE  360
AGDGNDGYAS PSQNSDRGGK GGKTKATSGN GRGRPKKARA KANDGEGDGD AEEKRNFWSV  420
EHIIALIRAK RDQDAHLQGM GHAYTWMKPR EWKWNDLPRK LKNVGVDRKP EKCGKKWDNL  480
MQQFKKVHHF QSSSGGIDFF QLNGKKRARP ASISTWTAPF TTRLKGPAVS TKPSTPKTLP  540
KLVPAAVCVS HRRQLLILKQ LVMPTPVRGG EDENEGSTRG SSQTPSSPHG FGKRKSTRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	7e-07	Trihelix family protein