PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG73464.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 296aa    MW: 32728.7 Da    PI: 9.0495
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG73464.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix31.45e-1041111265
    trihelix   2 WtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkik 65 
                 W+  +  aLi+a+r+ + +l+++         ++ +W+ v +++ + g+ r  ++C +kw+nl +++kk+ 
  GBG73464.1  41 WSVGHMVALIRAKRDQDAQLQASGhalarmwGREWKWAGVHERLLKVGVDRPTEKCGKKWDNLMQQFKKVH 111
                 9999999**************9755677777999***********************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MGSRGGKSRA SASTGRRGKK VVAWGGEDEG DGEPEGGRNF WSVGHMVALI RAKRDQDAQL  60
QASGHALARM WGREWKWAGV HERLLKVGVD RPTEKCGKKW DNLMQQFKKV HLFQGESWKE  120
DFFRLSAKER LAREFISNME WAVYDEIKGS IAKSHTIHSQ NIADPGEARG VQLPSGSSGG  180
PESVSDGDAG GDGNDEDDSS TRGCSQTTGS PGGFGKRKSM RQQTFEALTE CMEKHKTLMA  240
STLKSASKRQ CSIQIRQCEA LEAEVEVQKK HYAASDEVSK MMCHALREIV KAIRDR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.11e-07Trihelix family protein