PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG73060.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 367aa    MW: 40028.1 Da    PI: 6.9125
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG73060.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix42.71.5e-13187267174
    trihelix   1 rWtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtse 74 
                 rW + e+  L ++r+e++e ++++        lk++ W+ v ++mr++g++r  +qCk+k++++  +y++++++e+ + ++
  GBG73060.1 187 RWGETETEWLCQFRNEVKELMGQETeaygrvrLKAGFWKIVEERMRAKGYNRDHEQCKNKFNQILDYYRRLRAHEGWNMNQ 267
                 8**************99999996533444455*****************************************99876443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    
MRAMAMAEGL TPSMNSDTMP SQQHESGSAA TISPITQTTH RVSSESSRDG AVMQQQCPPA  60
ASSEYVLNRI IRDIEAGVRT LESDYVNVGG EAVSLHTSPS HTPSPLHTPG GVPAATPSPV  120
VRESGTHDTA PRSRSSPSPP AAIPSPINGN VSSHTPPSVS VPSGTCAGGL SQNTRRTPSS  180
GEKSTDRWGE TETEWLCQFR NEVKELMGQE TEAYGRVRLK AGFWKIVEER MRAKGYNRDH  240
EQCKNKFNQI LDYYRRLRAH EGWNMNQTRR KKYNVDFVLH RSWYDIIHPV EKDKDSINLT  300
NLMDSGADDE RVENGEGVSD RDGAMEGGSE DNGSRYGGSP GGSQSIGFEP TLGKRKRGAA  360
NARESSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76890.24e-06Trihelix family protein