PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG72774.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 1023aa MW: 110372 Da PI: 7.3727

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG72774.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	33.9	8.4e-11	427	499	2	67
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikeg 67 W+ + aL++arr m++++ r k ++ +We+v +++++ g++r + C +kw+nl +++kk+ + GBG72774.1 427 WSVGDTIALVRARRdqdlyiaGMGTSFARMKTREWKWEDVRARLQSMGVTRDVVDCGKKWDNLMQQFKKVHKF 499 899999******9999999999*******************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 1023 aa Download sequence
MLFPPGALRT ATVSLDKIVV FFDCRHASHV GAQNFHRSLF CRRASSLNGR PPTSHCSPLN 60 GPYMADLLHR LPLLVLVVVL LLLVVFFHVC FVGLVPIAAR RRRSSKKAHR MDRRLGNGRP 120 AGTTFGASNC QHSAGSVAKR PYDPRLYAGL PSHEIPLPPS DDEGGDARSS TLPLGSGSTQ 180 EWAATQSCGG GRVETPWTYM SLLNEGLCDD DDNAAVDLSF QLSSSSRAAA THTRIINPHP 240 GADCAHNTHG GVCGPRDGGL PQSLCEGGGK RNESTSTIDG GVGARERSEW MRLSPLSRSG 300 SGAPCARQRP EVLHQEGADI QRDSRQLWAE CRQASHQRGT ETITRGVQRL HVDEGNEAAA 360 EEARGCDDGD GDNDCNSDDL PDIRPLGRKA TKGGATARKG PAAKSRRNKK MDDDTGRSDG 420 EGGQNFWSVG DTIALVRARR DQDLYIAGMG TSFARMKTRE WKWEDVRARL QSMGVTRDVV 480 DCGKKWDNLM QQFKKVHKFL NLSGGKDYFK LASKERRSEG FNFVMDRSVY NEMEATTKGD 540 HTIHPKNLAD TGAAGGVQMP AGAGAAGDTM GSEGGGDAAN EEQGSTRDST FSAGSGDGAV 600 TFSSAASSSV VNTSSSSSSL AAEGGSMERG AGDGAQQEAR VAAEVAIAAA AAGSSGNVGV 660 VARAREEVPV VEREATRVDN KGEREDEDPL LSRVRRGGMA RDLADRARLW VDDKAFWTRG 720 EGRRLYNIVH ETWEYFVAIA GGMQTPPVPR SVVMPKSSTT VTRIADPAQL QQAIARAMAA 780 GNIALRVLHG WVFKSGNHPR GFNVAFQYAL ESVATDIARV MWNGEEWSNV VSAPVCAHTI 840 DPNMDLPLWF AGTNIEDRPE DDDMAAHQES TVICIARAFL AAVQMGGIVD GGFISHERLS 900 RITDCFRLML AACMWLMRIA GDNARNHHEA FYFAKLVAKP TLVASIHRAF DHRRSIIRAT 960 NAVTERLGKA NATLGEYPKY IPDRASCGIV FGQDASITGP EDAKRRDWLG SGPLKDDDAK 1020 EDA

Sequence ? help Back to Top

Protein Sequence Length: 1023 aa Download sequence

MLFPPGALRT ATVSLDKIVV FFDCRHASHV GAQNFHRSLF CRRASSLNGR PPTSHCSPLN  60
GPYMADLLHR LPLLVLVVVL LLLVVFFHVC FVGLVPIAAR RRRSSKKAHR MDRRLGNGRP  120
AGTTFGASNC QHSAGSVAKR PYDPRLYAGL PSHEIPLPPS DDEGGDARSS TLPLGSGSTQ  180
EWAATQSCGG GRVETPWTYM SLLNEGLCDD DDNAAVDLSF QLSSSSRAAA THTRIINPHP  240
GADCAHNTHG GVCGPRDGGL PQSLCEGGGK RNESTSTIDG GVGARERSEW MRLSPLSRSG  300
SGAPCARQRP EVLHQEGADI QRDSRQLWAE CRQASHQRGT ETITRGVQRL HVDEGNEAAA  360
EEARGCDDGD GDNDCNSDDL PDIRPLGRKA TKGGATARKG PAAKSRRNKK MDDDTGRSDG  420
EGGQNFWSVG DTIALVRARR DQDLYIAGMG TSFARMKTRE WKWEDVRARL QSMGVTRDVV  480
DCGKKWDNLM QQFKKVHKFL NLSGGKDYFK LASKERRSEG FNFVMDRSVY NEMEATTKGD  540
HTIHPKNLAD TGAAGGVQMP AGAGAAGDTM GSEGGGDAAN EEQGSTRDST FSAGSGDGAV  600
TFSSAASSSV VNTSSSSSSL AAEGGSMERG AGDGAQQEAR VAAEVAIAAA AAGSSGNVGV  660
VARAREEVPV VEREATRVDN KGEREDEDPL LSRVRRGGMA RDLADRARLW VDDKAFWTRG  720
EGRRLYNIVH ETWEYFVAIA GGMQTPPVPR SVVMPKSSTT VTRIADPAQL QQAIARAMAA  780
GNIALRVLHG WVFKSGNHPR GFNVAFQYAL ESVATDIARV MWNGEEWSNV VSAPVCAHTI  840
DPNMDLPLWF AGTNIEDRPE DDDMAAHQES TVICIARAFL AAVQMGGIVD GGFISHERLS  900
RITDCFRLML AACMWLMRIA GDNARNHHEA FYFAKLVAKP TLVASIHRAF DHRRSIIRAT  960
NAVTERLGKA NATLGEYPKY IPDRASCGIV FGQDASITGP EDAKRRDWLG SGPLKDDDAK  1020
EDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	3e-07	Trihelix family protein