PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG72737.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 427aa    MW: 47084.9 Da    PI: 6.5277
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG72737.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix32.81.9e-10172248271
    trihelix   2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71 
                 W+ +e l+L++ +r       ++++++ r k k ++W +++k+m+++ ++r  +q  ++wen+ + y+k+ ++ek+ 
  GBG72737.1 172 WSLNESLVLVRCKRdqndyfaNVGTNFARMKTKDQKWMDIAKRMEKERVRRDGEQSMKRWENIFGWYRKVWDREKDS 248
                 9*************66666666666666789*****************************************99973 PP
Sequence ? help Back to Top
Protein Sequence    Length: 427 aa     Download sequence    
MSRPTPSQAA PVGSVPYHQP AAGAAMQEQR ADVGGVAESP RCVERIVYRF NSLRATSEGD  60
GTGATMQERR PDLGGVAESP RCVERIVCRY NSSRPTSDGD VGGRDGGASE ADRVDVEDDD  120
GDEEDEDEAP VKEAVSSGTK KQASKVRGKA KGKDKEGNTN GEGSGSRVRG NWSLNESLVL  180
VRCKRDQNDY FANVGTNFAR MKTKDQKWMD IAKRMEKERV RRDGEQSMKR WENIFGWYRK  240
VWDREKDSGL QSYFLMTTKA RKEKGYRFNL DHTLYDAIHI MQGNNQAVHP PNLVDTSNTQ  300
GQQSQQGEQG QAAAGGGEAD TSASENWGAD TGDGCGSTSF SNGIQGKRKN VRQLAFEAVT  360
DVMKTHSTVV AESLDRASKR QCDVLQRQCD IMEREARTQE RQCEVLDVGH RMLCDALLKI  420
ASALARD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.16e-07Trihelix family protein