PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG72665.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 568aa MW: 59365.3 Da PI: 7.975

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG72665.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	30.1	1.3e-09	312	386	2	70
trihelix 2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 Wt +e +L ++ e++ + +++ + +W++ ++ mre+g++r+ + C++kw +l k+ ++i++ ++ GBG72665.1 312 WTLEERVKLATVAAEDDALMADAEgpqrhmTRCRRWQRTADPMREEGYSRTGEDCRKKWAELVKKVREIRDACEG 386 6666666666666666666665444444448889******************************99999987665 PP

Sequence ? help Back to Top
Protein Sequence Length: 568 aa Download sequence
MAGQGFTAKL YGDVGGSSGY YEAGGEVSEC TQARSDGGYP PLSWSYSPQT GCNIMPGEMQ 60 LTHLSHNVAI STHASATSAF GRPAMPPSAA TSSRQRTYNI SASGQGGSSA TGAGNWGSSE 120 SAREAPGCNQ RSPAMPTFSS ISARFGSTRD NAVEGVPSPN LGLQSPQRRL PQGGHQPCLR 180 PAGVTVQPAF HPQGSLQRVG GDGHLSEGES RNTHVTTPPP MRGSRASGVE RIDAAGEGYM 240 HDTGGQWEFG GNGSEDGGGG GKDAASGASG LTVGTTGTPS QERAPTNIMP PSSGQHRKAP 300 TPSAPPKKNS PWTLEERVKL ATVAAEDDAL MADAEGPQRH MTRCRRWQRT ADPMREEGYS 360 RTGEDCRKKW AELVKKVREI RDACEGSGQQ SYFDLTTDER RKKGVSLTFE KQLWDAMEWY 420 RLKASVKCDN TLASEDLRGG GSVPGSEGGS EGGGTDVSDG SAKTRRTSSG KARGRESAAN 480 VHWVASAMED STRAVCDRAA GTLARATTEG ASMMGARMGE MATGIGAVAR AMQQGNVVLE 540 MLVGVKAGRG SQRGRGVDEG AETDASSR

Sequence ? help Back to Top

Protein Sequence Length: 568 aa Download sequence

MAGQGFTAKL YGDVGGSSGY YEAGGEVSEC TQARSDGGYP PLSWSYSPQT GCNIMPGEMQ  60
LTHLSHNVAI STHASATSAF GRPAMPPSAA TSSRQRTYNI SASGQGGSSA TGAGNWGSSE  120
SAREAPGCNQ RSPAMPTFSS ISARFGSTRD NAVEGVPSPN LGLQSPQRRL PQGGHQPCLR  180
PAGVTVQPAF HPQGSLQRVG GDGHLSEGES RNTHVTTPPP MRGSRASGVE RIDAAGEGYM  240
HDTGGQWEFG GNGSEDGGGG GKDAASGASG LTVGTTGTPS QERAPTNIMP PSSGQHRKAP  300
TPSAPPKKNS PWTLEERVKL ATVAAEDDAL MADAEGPQRH MTRCRRWQRT ADPMREEGYS  360
RTGEDCRKKW AELVKKVREI RDACEGSGQQ SYFDLTTDER RKKGVSLTFE KQLWDAMEWY  420
RLKASVKCDN TLASEDLRGG GSVPGSEGGS EGGGTDVSDG SAKTRRTSSG KARGRESAAN  480
VHWVASAMED STRAVCDRAA GTLARATTEG ASMMGARMGE MATGIGAVAR AMQQGNVVLE  540
MLVGVKAGRG SQRGRGVDEG AETDASSR