PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG72137.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 837aa MW: 91700.2 Da PI: 7.5385

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG72137.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	27.2	1e-08	1	54	17	70
trihelix 17 meerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 m++++ r k+++ +We+v +++++ g++r ++ C +kw+n +++kki + ++ GBG72137.1 1 MGTSFARMKSREWKWEDVWARLQSMGVTRDAVDCGKKWDNFMQQFKKIHKFQNL 54 56789999***************************************9987765 PP

Sequence ? help Back to Top
Protein Sequence Length: 837 aa Download sequence
MGTSFARMKS REWKWEDVWA RLQSMGVTRD AVDCGKKWDN FMQQFKKIHK FQNLSDGKDY 60 FKLASKDRRS EGFSFVMDRS VYDEMEAMTK GDHTIHAKNL ADTGATGGVQ MPAGTGAAGD 120 TMATEGGGDT ADEEQGSTKD STFSAGSDDG YGKRKNMRQQ TFEAVANVME KHGALMASTM 180 DSASKRQCSM MSCQCEILES EVEVQMKHYA AADESNRMMS AHTLHSDNIH AGRPLPFLLV 240 VAESLISSLS LSTWFVFDVV VSSLWIFSIS FSRRNLLAAD PYHALSGPTS ISRQHLLLAA 300 ERCTLASSPS CVGLHQCRCR SSLLPFIVLP LAVDPSRRGY ISPLRRSAVT SRRSSSHRGE 360 VSAGFISFSR SRPRGRGVRG EGEDELLPRA AKALVRRRRE QRRGHKRPLT EAGNMSTHDG 420 ARGKKRENIP ADSQGRERAN EEEDDDEFTT EEEAAEENVA APRGSTLQRS CDLSGARRLA 480 TPPPKAQQVR AHNTQKAKEV VVDVGGEDDE ALERRRQRNV TQGATVTAVR IRAATEERPP 540 LGGVPLTSSQ PCLRNTAAEG GSMERGGGEG AQQETHVAGG VAIAAAAAGC SGNVGVVARA 600 REEVLVVERE AAPVDNNGER EDEDPLLSRV RRGGMARDLA NCARLWVDDK AGMQTPPVPR 660 SVVMPKSSTT LTRIADPAQL QQATARATTA ENIALRVLHG WVFKSGNRPR GFNVAFQYTL 720 ESVATDIARV MWNDEEWSKV VSVPVCVHTI DLNMDLPLWF AGTNIEDRPE DNDMAAHKES 780 TVVCIAYAFR TAVQMGGIVN GGFISHERLC RIADCFRLLL AACMWLMRMA GDDVRSH

Sequence ? help Back to Top

Protein Sequence Length: 837 aa Download sequence

MGTSFARMKS REWKWEDVWA RLQSMGVTRD AVDCGKKWDN FMQQFKKIHK FQNLSDGKDY  60
FKLASKDRRS EGFSFVMDRS VYDEMEAMTK GDHTIHAKNL ADTGATGGVQ MPAGTGAAGD  120
TMATEGGGDT ADEEQGSTKD STFSAGSDDG YGKRKNMRQQ TFEAVANVME KHGALMASTM  180
DSASKRQCSM MSCQCEILES EVEVQMKHYA AADESNRMMS AHTLHSDNIH AGRPLPFLLV  240
VAESLISSLS LSTWFVFDVV VSSLWIFSIS FSRRNLLAAD PYHALSGPTS ISRQHLLLAA  300
ERCTLASSPS CVGLHQCRCR SSLLPFIVLP LAVDPSRRGY ISPLRRSAVT SRRSSSHRGE  360
VSAGFISFSR SRPRGRGVRG EGEDELLPRA AKALVRRRRE QRRGHKRPLT EAGNMSTHDG  420
ARGKKRENIP ADSQGRERAN EEEDDDEFTT EEEAAEENVA APRGSTLQRS CDLSGARRLA  480
TPPPKAQQVR AHNTQKAKEV VVDVGGEDDE ALERRRQRNV TQGATVTAVR IRAATEERPP  540
LGGVPLTSSQ PCLRNTAAEG GSMERGGGEG AQQETHVAGG VAIAAAAAGC SGNVGVVARA  600
REEVLVVERE AAPVDNNGER EDEDPLLSRV RRGGMARDLA NCARLWVDDK AGMQTPPVPR  660
SVVMPKSSTT LTRIADPAQL QQATARATTA ENIALRVLHG WVFKSGNRPR GFNVAFQYTL  720
ESVATDIARV MWNDEEWSKV VSVPVCVHTI DLNMDLPLWF AGTNIEDRPE DNDMAAHKES  780
TVVCIAYAFR TAVQMGGIVN GGFISHERLC RIADCFRLLL AACMWLMRMA GDDVRSH