PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG72085.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

E2F/DP

Protein Properties

Length: 1319aa MW: 142165 Da PI: 7.6155

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG72085.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	46.6	5.6e-15	544	629	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek..........kekneirwkg 71 r++ksLr l+++f++l+ ee++v+ + v +L+ + ++k RR+YDi+N+L +l+l++k + +++++w g GBG72085.1 544 RRNKSLRALSERFVQLFLLDEERAVEWEYVVGKLLGVacdtqNLQTKARRLYDIANILGSLHLVTKlqiwpqapnsMPRPAYKWLG 629 678*****************************887999999999******************88888888888888888876 PP

Sequence ? help Back to Top
Protein Sequence Length: 1319 aa Download sequence
MYEFAFAFAQ GLYEMGELQD RDRLSPAYKL GKQKCSYNQV RLDFSMLGGQ HADLSVAEAI 60 ESPVGNDLGE RLRECSLKFN VRFSNNYRVR LYVVLVYSKA YCELSSNPVS CTTTRVPTLT 120 QMGGAAGCCE EDVLSTSARR RFGGGGVHVL PLPASHSRTA GPGSGGVGGV GGVGAGGGGG 180 IGCCAGGVDR PVVRLPYRWR AVSRSACQKQ CTGPILRGLQ RFGKVAKKKS GSKGSDSEEE 240 TWKEPKHLYI AIDEASSHIS IDDPCKRNSP TKPNTRFRLA VAVFNDSDQI IGTAVSNPIH 300 VVANNDAPKG VARITLQCLL NGGSGLQSSH VSDAYSALPL RHNFTTPLSA CLDSSAPFTF 360 SSQLSHPSPR TPSSALPSPC LPAFCNRSSQ SFSATAPGAD ITARLLSSST SFLQKEHMPV 420 GPPPRPGMTV GESMAASYLL QMAERQMRRA KNEYVWCGSR LVSETLQRLK ADVLAVQAVE 480 QTEGACSVQD VTTLSSTDDQ EEEITMDSNM NLREGETGGG GQSSQRQANY NHDMETVHGS 540 RMQRRNKSLR ALSERFVQLF LLDEERAVEW EYVVGKLLGV ACDTQNLQTK ARRLYDIANI 600 LGSLHLVTKL QIWPQAPNSM PRPAYKWLGA RGVEQRLAMA LELHSPKATG VSGVTYGAGV 660 AVGPSKSHRN VDEQLLKEVV GNASYGSQRS LQHVEPWLGT IGCRGGMGSL KREREPSELT 720 LEERVRKFQF RSSMACQTAE GNTNMNAVPS SCNAIPPNHV PPWSGDVFRG GGTANISPAI 780 RHLGSLKRDR EEVVLMEERL RKAPFGSSCE SQLYHAASIN QDDGLPSSSD TALPAVGPSL 840 SMGLSINAED NKRVRRFKGL GGGTLTTPVS ANSESLYLVR RPGRAQELSM VHSPPLPSVA 900 AATAVAACTS VDSRDCSFAT SSSPRPERSS EGVGEISGHS EWRTGESLRF FNSDEAVEKS 960 SYVTEQRRCS RNGAGSAEAM VNGQGSAAHV RGEFGLRLGL QCSDDQGQLQ HMCPKSRAHR 1020 SNCCATSSGA KDALQEGTND DSLVTVRSLL NKPDDALSLG LGFSSKRHLE QRPAGAGHSH 1080 MDLNGPFPAV PVLDTGREEE FAQQAGCTSS SNWPLANRLR TGLTTQRLNE VVEQRPGFMN 1140 DIVRYSNALR GALKSSRAPG GTGTNAADGI YLMDAVSSQE RLQTIVKGDV GWANGHQDEC 1200 KTREGCGWDL EASKRERERV QQRTAAIHAT DSYEAAGDNL AIRLHSGDEM DTTMQPSEAA 1260 AECRRNSGVS PPHELVIRVP EVLARERRSP ELESTNGQEV GRTFIDCNQP ASDDCEGSN

Sequence ? help Back to Top

Protein Sequence Length: 1319 aa Download sequence

MYEFAFAFAQ GLYEMGELQD RDRLSPAYKL GKQKCSYNQV RLDFSMLGGQ HADLSVAEAI  60
ESPVGNDLGE RLRECSLKFN VRFSNNYRVR LYVVLVYSKA YCELSSNPVS CTTTRVPTLT  120
QMGGAAGCCE EDVLSTSARR RFGGGGVHVL PLPASHSRTA GPGSGGVGGV GGVGAGGGGG  180
IGCCAGGVDR PVVRLPYRWR AVSRSACQKQ CTGPILRGLQ RFGKVAKKKS GSKGSDSEEE  240
TWKEPKHLYI AIDEASSHIS IDDPCKRNSP TKPNTRFRLA VAVFNDSDQI IGTAVSNPIH  300
VVANNDAPKG VARITLQCLL NGGSGLQSSH VSDAYSALPL RHNFTTPLSA CLDSSAPFTF  360
SSQLSHPSPR TPSSALPSPC LPAFCNRSSQ SFSATAPGAD ITARLLSSST SFLQKEHMPV  420
GPPPRPGMTV GESMAASYLL QMAERQMRRA KNEYVWCGSR LVSETLQRLK ADVLAVQAVE  480
QTEGACSVQD VTTLSSTDDQ EEEITMDSNM NLREGETGGG GQSSQRQANY NHDMETVHGS  540
RMQRRNKSLR ALSERFVQLF LLDEERAVEW EYVVGKLLGV ACDTQNLQTK ARRLYDIANI  600
LGSLHLVTKL QIWPQAPNSM PRPAYKWLGA RGVEQRLAMA LELHSPKATG VSGVTYGAGV  660
AVGPSKSHRN VDEQLLKEVV GNASYGSQRS LQHVEPWLGT IGCRGGMGSL KREREPSELT  720
LEERVRKFQF RSSMACQTAE GNTNMNAVPS SCNAIPPNHV PPWSGDVFRG GGTANISPAI  780
RHLGSLKRDR EEVVLMEERL RKAPFGSSCE SQLYHAASIN QDDGLPSSSD TALPAVGPSL  840
SMGLSINAED NKRVRRFKGL GGGTLTTPVS ANSESLYLVR RPGRAQELSM VHSPPLPSVA  900
AATAVAACTS VDSRDCSFAT SSSPRPERSS EGVGEISGHS EWRTGESLRF FNSDEAVEKS  960
SYVTEQRRCS RNGAGSAEAM VNGQGSAAHV RGEFGLRLGL QCSDDQGQLQ HMCPKSRAHR  1020
SNCCATSSGA KDALQEGTND DSLVTVRSLL NKPDDALSLG LGFSSKRHLE QRPAGAGHSH  1080
MDLNGPFPAV PVLDTGREEE FAQQAGCTSS SNWPLANRLR TGLTTQRLNE VVEQRPGFMN  1140
DIVRYSNALR GALKSSRAPG GTGTNAADGI YLMDAVSSQE RLQTIVKGDV GWANGHQDEC  1200
KTREGCGWDL EASKRERERV QQRTAAIHAT DSYEAAGDNL AIRLHSGDEM DTTMQPSEAA  1260
AECRRNSGVS PPHELVIRVP EVLARERRSP ELESTNGQEV GRTFIDCNQP ASDDCEGSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01330.1	2e-16	E2F/DP family protein