PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG71351.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

bHLH

Protein Properties

Length: 1260aa MW: 125773 Da PI: 7.0012

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG71351.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.8	2.2e-14	340	383	7	55
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++Er+RR+r+N afeeLr+ +P a +K Ka+ Le+A +YI++Lq GBG71351.1 340 IAERKRRKRMNAAFEELRRAIPDA-----PKRGKADLLERAAKYIRDLQ 383 79*******************9.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 1260 aa Download sequence
MMFKERTALE GKRYAVDHDS RDGDDARGDD LLVGTGNRAS DPTAHHSHTR SSATSAISST 60 IMPSTTASNG TNCPPATNIH LNNHSNRTNN TDSHSNRSTS GNNNTANGNK NVTLVFIQRY 120 VGNGGGVMAS GERSGWEGGK AGGGGGGASA AGEGMMHHHY HSNSSQSSPR YMGAGVGIME 180 GGGVGGVGAV GGGGAGGGHA DLGNGHAAAE NGAGGGGGGG GGGLVVGGSS GGGGGGGGGS 240 AGSAGCAVVT ARPTLCWQKG TSSTKGGGSS NSLSDDGEGG GGVDDDTDDP DVAEGGEGGT 300 GMKSGAASKG RHEAPGGRGS GAGAYAFTKA VDHHCTVTAI AERKRRKRMN AAFEELRRAI 360 PDAPKRGKAD LLERAAKYIR DLQQGCADRS SVGSSAGCSP AAAAAVVAGA APAPVTVQTV 420 GGGGASNTAA AAAVAASMEL RAASERETAA GGGGMAGGGG RGGCGGGGGV RSNIWRAAHG 480 AGREEGAGEG GSAAGIADAP PPPPRAPLLS IVRGSGGEEG RQEEQQAVGA SLYYFGNGLK 540 RKHPSAFALS AAAESAPTEE AAQFPPRGVE IGSARLQQQL QHCASMREIE KDGGGVPCEP 600 APLASTWHQE GRPAAEAALD SPRCLEQSPK RRALVSRQCA SLSSPPAAAA APPPPPPPAP 660 PSPPPLGNPT GCLGSNTSLH LARGGGGGGG DTVVGAAGGE GGAIGRGAGS GIGAGPCGGM 720 SVGSGAGSGI GAGPCGGMSV GSGLTMEYAA CAGSMLRERE VEDACRDDEQ QQQQQHHSQQ 780 HCEPTRGAEP RMGCWLSRSH STGSSPQRRD LMTRGIPTRM PSSGASPPVV ETVDLTRGME 840 ENGIDRCAAA REAAARLRSL SEQCFQHPHH VMPLASSSES LMGCGSSRYG GGGGGGVEDA 900 TVSVGIGPRR GAWEVYKRAR PAAPANHLVV GTTTTTTATA AALERRLDER RLEERKRMES 960 SSPPPPPRGS GGGAAANGFY IRSNHALPRG CSRDGGTDDD GERHVEEVER LEVEDDDDEE 1020 ESTVPVSLSL FPTTSSPARK ESNAAREGPD GAARPSCLSA GLPVGICTTS SPTASPSASA 1080 AAEVPWVTSR FYVSSVDGRA QAITMEFPSC EGRYGDERGI FAKVVDLLSS KGFGPKKAGM 1140 AWEAGRTRFE FSFEEGTGPS GTDGQMDRLE MALKGVFVPQ GQQGAGGRGG GGGGGGGGGG 1200 GGRANMQQQH GGGVQMDLRG GGGGGRGGIR YTNRTASLLG VMGRPVEQQV RVKLEPTEGR

Sequence ? help Back to Top

Protein Sequence Length: 1260 aa Download sequence

MMFKERTALE GKRYAVDHDS RDGDDARGDD LLVGTGNRAS DPTAHHSHTR SSATSAISST  60
IMPSTTASNG TNCPPATNIH LNNHSNRTNN TDSHSNRSTS GNNNTANGNK NVTLVFIQRY  120
VGNGGGVMAS GERSGWEGGK AGGGGGGASA AGEGMMHHHY HSNSSQSSPR YMGAGVGIME  180
GGGVGGVGAV GGGGAGGGHA DLGNGHAAAE NGAGGGGGGG GGGLVVGGSS GGGGGGGGGS  240
AGSAGCAVVT ARPTLCWQKG TSSTKGGGSS NSLSDDGEGG GGVDDDTDDP DVAEGGEGGT  300
GMKSGAASKG RHEAPGGRGS GAGAYAFTKA VDHHCTVTAI AERKRRKRMN AAFEELRRAI  360
PDAPKRGKAD LLERAAKYIR DLQQGCADRS SVGSSAGCSP AAAAAVVAGA APAPVTVQTV  420
GGGGASNTAA AAAVAASMEL RAASERETAA GGGGMAGGGG RGGCGGGGGV RSNIWRAAHG  480
AGREEGAGEG GSAAGIADAP PPPPRAPLLS IVRGSGGEEG RQEEQQAVGA SLYYFGNGLK  540
RKHPSAFALS AAAESAPTEE AAQFPPRGVE IGSARLQQQL QHCASMREIE KDGGGVPCEP  600
APLASTWHQE GRPAAEAALD SPRCLEQSPK RRALVSRQCA SLSSPPAAAA APPPPPPPAP  660
PSPPPLGNPT GCLGSNTSLH LARGGGGGGG DTVVGAAGGE GGAIGRGAGS GIGAGPCGGM  720
SVGSGAGSGI GAGPCGGMSV GSGLTMEYAA CAGSMLRERE VEDACRDDEQ QQQQQHHSQQ  780
HCEPTRGAEP RMGCWLSRSH STGSSPQRRD LMTRGIPTRM PSSGASPPVV ETVDLTRGME  840
ENGIDRCAAA REAAARLRSL SEQCFQHPHH VMPLASSSES LMGCGSSRYG GGGGGGVEDA  900
TVSVGIGPRR GAWEVYKRAR PAAPANHLVV GTTTTTTATA AALERRLDER RLEERKRMES  960
SSPPPPPRGS GGGAAANGFY IRSNHALPRG CSRDGGTDDD GERHVEEVER LEVEDDDDEE  1020
ESTVPVSLSL FPTTSSPARK ESNAAREGPD GAARPSCLSA GLPVGICTTS SPTASPSASA  1080
AAEVPWVTSR FYVSSVDGRA QAITMEFPSC EGRYGDERGI FAKVVDLLSS KGFGPKKAGM  1140
AWEAGRTRFE FSFEEGTGPS GTDGQMDRLE MALKGVFVPQ GQQGAGGRGG GGGGGGGGGG  1200
GGRANMQQQH GGGVQMDLRG GGGGGRGGIR YTNRTASLLG VMGRPVEQQV RVKLEPTEGR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	138	146	GGKAGGGGG
2	457	465	GGKAGGGGG
3	458	466	GGKAGGGGG
4	459	467	GGKAGGGGG
5	1186	1194	GGKAGGGGG
6	1188	1203	RGGGGGGGGGGGGGGR