PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG71213.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 1097aa MW: 119224 Da PI: 7.1254

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG71213.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	39.6	1.3e-12	352	427	2	70
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 W+ + + aLi+a+r+ + +l+ r k ++ +W v+ ++++ g+ r++ +C +kw+nl +++kk+ + ++ GBG71213.1 352 WSVDDIIALIRAKRDQDAHLQgmghvyaRMKPREWKWLNVATRLKKVGVDREADRCGKKWDNLMQQFKKVHHFQGL 427 99**********9998888544444456899999*******************************9887665 PP

Sequence ? help Back to Top
Protein Sequence Length: 1097 aa Download sequence
MABVFRRLPL LLLVVLLLLL LVVFHVCILG GLPRRGRRRR CVKNNDRMEG QKAISGSAGE 60 CGGRWSGNSP SNSPRPSEQS GHAHLPPHLQ PLPDTDDEEG DDRRSLTVPL GSGSTQEWVA 120 TELFGSRDGG KGQSYTELLQ QGISDTDGDG GVNLSFGLGS GRSAVVSRTV VVNPHPHDDG 180 SDVTAVQRSP RSPAPLREAS GNNNDPPRQQ FRSPSVCRGR RVGECRETAP AVADVGDARD 240 GREVWAEQRQ LMRSVREESI TRGVQRLRVG EDGHDGEDAG ADAHDPDWND NGAEGWEDDA 300 ANISPSKQAA AMGGRGGKTK SCSGNGRRGK RTAGKGSDAE GDVDGEGGRH FWSVDDIIAL 360 IRAKRDQDAH LQGMGHVYAR MKPREWKWLN VATRLKKVGV DREADRCGKK WDNLMQQFKK 420 VHHFQGLSGK QDFFQLSGKD RMSKGLKHDD DDDGSTKGSS QTTGGTGGFG KRKSTRQQTF 480 EAMTECMEKH GALMASTMES NSKRHCSIAI RQCEALEAEI EVQKKHYAAS DEILAFVVQI 540 VIVTAGASCA MSSRASTRGK AAANLSQQPA TREKKGRHMA SKKRKILEGA PAHGGYVLDE 600 EWVPKDVATQ EGTDFEDSDD MPLQRKSSRR GSGGIRIDDA GERRRAGGRP VPEDVVDVDA 660 ATTAKEGGGN RAPLPRMTPP TDTQEGVVCL RTPLTPRSRT AADVALSGGP SQAAGGVRAG 720 GAAGYAAKGG ESNAGEGATA GVKASDVAGE GDDDDPSVNR LRQQNTREME AAAKLWVDDL 780 RFWNEREGFA IVKLIAEARG YLVVVARGEQ PPPIRRSIVL PHNSIPQHKI TDESELNVAK 840 ERALKVQGIA LRVIHGWVFK SQNMQRGYHA AYQYALNHAA TDIARAMWMG EDWRYCVSPM 900 VIHHTLDMHM KLPLWFVGAD VEDRHEDDGL AAYQEASIQR LVGDFTSAVI IAEATDGDRV 960 SHERLKTMAD AMRMMLAATM WLMRMAGDDH RAHYNAWVFV QLTAKPTLVA SMHRCFDARR 1020 HIVQAVTVIT DKLASPPITL IDPPMYVPDW ASIGVKFSHD ATLSSPMEAK KVDWLGTGPP 1080 EDEDDGKGDE QGSGGGR

Sequence ? help Back to Top

Protein Sequence Length: 1097 aa Download sequence

MABVFRRLPL LLLVVLLLLL LVVFHVCILG GLPRRGRRRR CVKNNDRMEG QKAISGSAGE  60
CGGRWSGNSP SNSPRPSEQS GHAHLPPHLQ PLPDTDDEEG DDRRSLTVPL GSGSTQEWVA  120
TELFGSRDGG KGQSYTELLQ QGISDTDGDG GVNLSFGLGS GRSAVVSRTV VVNPHPHDDG  180
SDVTAVQRSP RSPAPLREAS GNNNDPPRQQ FRSPSVCRGR RVGECRETAP AVADVGDARD  240
GREVWAEQRQ LMRSVREESI TRGVQRLRVG EDGHDGEDAG ADAHDPDWND NGAEGWEDDA  300
ANISPSKQAA AMGGRGGKTK SCSGNGRRGK RTAGKGSDAE GDVDGEGGRH FWSVDDIIAL  360
IRAKRDQDAH LQGMGHVYAR MKPREWKWLN VATRLKKVGV DREADRCGKK WDNLMQQFKK  420
VHHFQGLSGK QDFFQLSGKD RMSKGLKHDD DDDGSTKGSS QTTGGTGGFG KRKSTRQQTF  480
EAMTECMEKH GALMASTMES NSKRHCSIAI RQCEALEAEI EVQKKHYAAS DEILAFVVQI  540
VIVTAGASCA MSSRASTRGK AAANLSQQPA TREKKGRHMA SKKRKILEGA PAHGGYVLDE  600
EWVPKDVATQ EGTDFEDSDD MPLQRKSSRR GSGGIRIDDA GERRRAGGRP VPEDVVDVDA  660
ATTAKEGGGN RAPLPRMTPP TDTQEGVVCL RTPLTPRSRT AADVALSGGP SQAAGGVRAG  720
GAAGYAAKGG ESNAGEGATA GVKASDVAGE GDDDDPSVNR LRQQNTREME AAAKLWVDDL  780
RFWNEREGFA IVKLIAEARG YLVVVARGEQ PPPIRRSIVL PHNSIPQHKI TDESELNVAK  840
ERALKVQGIA LRVIHGWVFK SQNMQRGYHA AYQYALNHAA TDIARAMWMG EDWRYCVSPM  900
VIHHTLDMHM KLPLWFVGAD VEDRHEDDGL AAYQEASIQR LVGDFTSAVI IAEATDGDRV  960
SHERLKTMAD AMRMMLAATM WLMRMAGDDH RAHYNAWVFV QLTAKPTLVA SMHRCFDARR  1020
HIVQAVTVIT DKLASPPITL IDPPMYVPDW ASIGVKFSHD ATLSSPMEAK KVDWLGTGPP  1080
EDEDDGKGDE QGSGGGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	6e-07	Trihelix family protein