PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG71204.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 306aa    MW: 33582.4 Da    PI: 8.5087
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG71204.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix32.71.9e-10155229269
    trihelix   2 WtkqevlaLiearremeerlrrg.......klkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 
                 W+ ++  +L++a+ + + +++         k ++ +W++v +++++ g+ r+p+ C +kw+nl +++kk+ + + 
  GBG71204.1 155 WSVDHMVTLVRAKWDQDAHMEGMghafacmKPREWKWQDVHERLKKVGIARNPENCGKKWDNLMQQFKKVHRFMH 229
                 88888888888888665555532122222279999**********************************987655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MHQSSTGRGV GSSAGSSAAD KTRDRRCVQS KSMPTTCPEV VRPQRVQLPS PLSGGLVTGR  60
RSVVSVADAT FAQDVDERTG SHVWAEHRQE LHLDDEDEED EDVAVEIKPP GKRSMGGRGT  120
SKKASAPHGR RTEKSVSVGS DGEGDVDVDG GRNFWSVDHM VTLVRAKWDQ DAHMEGMGHA  180
FACMKPREWK WQDVHERLKK VGIARNPENC GKKWDNLMQQ FKKVHRFMHE SGKPDYFQLK  240
GKERRSHIFN FVMERAVYEE IKGPTAKNHT IHPRNVIDTG APSGVEMSSG SGGKRGDGDC  300
AGGGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.12e-06Trihelix family protein