PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG70797.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 282aa    MW: 31942.4 Da    PI: 7.9967
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG70797.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix25.82.8e-0831106271
    trihelix   2 WtkqevlaLiearremeerlrr......gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71 
                 W  +++++Li ar ++   + +      g++    W +vs++m  +g++rs  +C++ w+ + + y  i e+e + 
  GBG70797.1  31 WGVDKTMQLIHARARTPGGFLTkrigveGRQHLRGWHDVSARMLVEGYTRSWFECRKWWKAVLTVYMDIVEHEHRI 106
                 999***********9999998622222257************************************9999999874 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MVLSAEKGMT IQRSESLLLI ENAKVDDDND WGVDKTMQLI HARARTPGGF LTKRIGVEGR  60
QHLRGWHDVS ARMLVEGYTR SWFECRKWWK AVLTVYMDIV EHEHRIGVQT YWKMTPVERE  120
LCDLAKNFRR EWFDLIDAYA QSQDIPPEGA TSGLGKAPRR AKQQKQAAKP ATALKTVRAD  180
GPGSAVASKR MRCAVEKLSQ SLKRICMTSD SMKCSQLCTE ALERHGALMS SSQEEAAAVI  240
AAKLDEGWRL VAKFTTEPTV DEERSTSTDY KDEYFTRCEC SD