PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG70720.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 600aa MW: 66502.4 Da PI: 9.1626

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG70720.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	38	4.4e-12	49	121	2	67
trihelix 2 WtkqevlaLiearremeerlrrg.......klkkplWeevskkmrergferspkqCkekwenlnkrykkikeg 67 W+ ++ aLi+a+++ + +l+++ ++++ +W +v +++ + g+ rs+ +C +kw+nl +++kki + GBG70720.1 49 WSVDHMVALIRAKQDQDAQLQAAghafarmRSREWKWLDVRERLLKVGVDRSADKCGKKWDNLMQQFKKIHTF 121 999*********9999999753333333699**********************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 600 aa Download sequence
MFPLRAPNMG GRGGRGRAST NAGRRWKRPS VTFADAEGEG DGEGGRNFWS VDHMVALIRA 60 KQDQDAQLQA AGHAFARMRS REWKWLDVRE RLLKVGVDRS ADKCGKKWDN LMQQFKKIHT 120 FMGMSGKEDF FQLTSQQRAE KDSASTWIGP STRRSKGRRR GATLSARAML QTPVAQEDVQ 180 AAQDVGKHPP MRAPSNPATP TVGQARRDEG AGVNAAVRGQ LATHIPAKEA AAVGAVVGTS 240 TTCAGGGGGD GRDDADDDDP LINRQRRSRN MAALEAKAKL WVDDLRFWNE TEGHGMFKII 300 QETRLHLIAI AKGVKPPEIR KSVVLPNVTI PQQKLEDVSK LGPAKERTPR VQTIALRIIH 360 GWIFKSPNRA RGYHCSYGYV LNHVATDLAR AIWFGEDWRV CVSPAVVHNT LELHMKLPIW 420 YVGGVIHDRH EDDEMASYQE STTQRLVGAF TNAVDTGEGV DGGRISYERL RNVADCMRLL 480 LSAAMWIMRM AGDNLRSHYE ASHLVELIAK PTLIASLHRS FDARRHVLRC VNAVTEKMGK 540 PPMTLVDPPV YIPDWVSCGV SFHNDATLTS PELARRLDWL GTGPPEIDDE DEEKDEGGES

Sequence ? help Back to Top

Protein Sequence Length: 600 aa Download sequence

MFPLRAPNMG GRGGRGRAST NAGRRWKRPS VTFADAEGEG DGEGGRNFWS VDHMVALIRA  60
KQDQDAQLQA AGHAFARMRS REWKWLDVRE RLLKVGVDRS ADKCGKKWDN LMQQFKKIHT  120
FMGMSGKEDF FQLTSQQRAE KDSASTWIGP STRRSKGRRR GATLSARAML QTPVAQEDVQ  180
AAQDVGKHPP MRAPSNPATP TVGQARRDEG AGVNAAVRGQ LATHIPAKEA AAVGAVVGTS  240
TTCAGGGGGD GRDDADDDDP LINRQRRSRN MAALEAKAKL WVDDLRFWNE TEGHGMFKII  300
QETRLHLIAI AKGVKPPEIR KSVVLPNVTI PQQKLEDVSK LGPAKERTPR VQTIALRIIH  360
GWIFKSPNRA RGYHCSYGYV LNHVATDLAR AIWFGEDWRV CVSPAVVHNT LELHMKLPIW  420
YVGGVIHDRH EDDEMASYQE STTQRLVGAF TNAVDTGEGV DGGRISYERL RNVADCMRLL  480
LSAAMWIMRM AGDNLRSHYE ASHLVELIAK PTLIASLHRS FDARRHVLRC VNAVTEKMGK  540
PPMTLVDPPV YIPDWVSCGV SFHNDATLTS PELARRLDWL GTGPPEIDDE DEEKDEGGES