PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG70710.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 302aa    MW: 33382.5 Da    PI: 6.3264
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG70710.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix33.21.3e-10119194270
    trihelix   2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 
                 W  +e l+L++ ++       ++++++ r k k ++W++++k+m ++g++r   qC ++w n+ +  +++ ++ek+
  GBG70710.1 119 WNLNESLVLVRCKQdqedyfaNVGTNFARMKTKDQKWADIAKRMDKEGVRRDGDQCMKRWGNIFGWNRNVWDREKE 194
                 999999********44444444444444678*******************************98777777666665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MDMSRMVLIN ENGHGTGSTS QAMQDAEFDE GVSQHWPNQA SSAGEGALQG GAASEPELVG  60
VDVDDDDDED DEEEEVVMKE VTPGGKRKQT SKGRGKVKAT GKEGGTNGKG GESGGRVNWN  120
LNESLVLVRC KQDQEDYFAN VGTNFARMKT KDQKWADIAK RMDKEGVRRD GDQCMKRWGN  180
IFGWNRNVWD REKESGLQSY FLMSSKTRRE KGYKFNLDRT LYDAIHIMQG NNQAVHPPNI  240
ADTGNRQAHQ SQQGEHSQAA VDGGEADTSA SKNKEAMDMA AGHQRTVRRG SGRTSGNWHS  300
RR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.12e-09Trihelix family protein