PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG70573.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 628aa MW: 66684.2 Da PI: 6.2425

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG70573.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	31.2	5.8e-10	370	424	16	70
trihelix 16 emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 e+ e +rr++lk++ W v ++mre+g++r +q k+k++++ +y+++k++ek GBG70573.1 370 EDTEVYRRARLKAGFWNIVEQRMREKGYNRRDEQGKNKFNQIMEYYRRLKAHEKW 424 4445556778******************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 628 aa Download sequence
MANHTGQQGL SAIPDWGYSE SQDLGPCEAD AGPVHSTQVP GHTVQGDGIP GLWSGVSASG 60 GGSHPPYPAH INAEGFTPPS AFADLHPACG SDGVDRSAHS AGVGWGHXPS MWKVTDGVGG 120 SLQPTNAVPG GAPLSSPVTP VRGFRIGLGG EDENTLRQRL RQRAMRVADG LPVDLDGGVL 180 AGSDAPAPRP EAVHHASPAA SGAFSRGGAT VSGQXSPAGS GTTHGHRGDG SLQHMQEDAG 240 DTXLPCNEQT TQSYYVLNHL IRDNERSASP VQPVHNSDVG ANGLGAQETP QQQTPPSCGR 300 SSGARTDTPS PVPSGLQSGA GTTASQSGGG ASTPPAPGSS SPPPNTERSG DTETDWLCRF 360 RNEVRTLMGE DTEVYRRARL KAGFWNIVEQ RMREKGYNRR DEQGKNKFNQ IMEYYRRLKA 420 HEKWSGWQSY WDMNKAQRKR YNVDFVLKRS WYDIIDPGEK DKDSIDLSNL IDSGEDEECL 480 EDEDDAADHG SGAGGASGDP PAGVGGSTSG SQGAGIEPTL GKRKRGYVSA RESSVQSVTI 540 VMRAHTVALT RSDKECAVMR IEATRAIATQ QVEARRELVL QEIASRERIA DRMGERVERG 600 YSALADAIRS LRSRRGSSRE SPSSSDSR

Sequence ? help Back to Top

Protein Sequence Length: 628 aa Download sequence

MANHTGQQGL SAIPDWGYSE SQDLGPCEAD AGPVHSTQVP GHTVQGDGIP GLWSGVSASG  60
GGSHPPYPAH INAEGFTPPS AFADLHPACG SDGVDRSAHS AGVGWGHXPS MWKVTDGVGG  120
SLQPTNAVPG GAPLSSPVTP VRGFRIGLGG EDENTLRQRL RQRAMRVADG LPVDLDGGVL  180
AGSDAPAPRP EAVHHASPAA SGAFSRGGAT VSGQXSPAGS GTTHGHRGDG SLQHMQEDAG  240
DTXLPCNEQT TQSYYVLNHL IRDNERSASP VQPVHNSDVG ANGLGAQETP QQQTPPSCGR  300
SSGARTDTPS PVPSGLQSGA GTTASQSGGG ASTPPAPGSS SPPPNTERSG DTETDWLCRF  360
RNEVRTLMGE DTEVYRRARL KAGFWNIVEQ RMREKGYNRR DEQGKNKFNQ IMEYYRRLKA  420
HEKWSGWQSY WDMNKAQRKR YNVDFVLKRS WYDIIDPGEK DKDSIDLSNL IDSGEDEECL  480
EDEDDAADHG SGAGGASGDP PAGVGGSTSG SQGAGIEPTL GKRKRGYVSA RESSVQSVTI  540
VMRAHTVALT RSDKECAVMR IEATRAIATQ QVEARRELVL QEIASRERIA DRMGERVERG  600
YSALADAIRS LRSRRGSSRE SPSSSDSR