PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG70000.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 306aa    MW: 33412.5 Da    PI: 4.8298
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG70000.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix29.12.6e-09196278279
    trihelix   2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79 
                 W +  ++aLi+a+           e++++g+  k+ Wee++k+++  g++++  +C+ +w+++   y+++++  k+  s+ +s +
  GBG70000.1 196 WAHLDTMALIRAKGdrhvaraVNYEDIGNGRTSKKAWEEIAKVLAIVGMRKTWLECQTRWRSIWATYRQVTTLHKG--SGIQSYW 278
                 9999*********944443333334444678**************************************9998886..4444455 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MYEGVTEEVS SSGGVAVNVQ ANGGDDFGRF GGLQGGDSRM ARDRPYGESS EVGARSAGAG  60
APVGGQETVV EMQWTVVSSP TPSRDDCRGM AENGSSGGAA CNMDTYMHVE EGFGNDMLSG  120
DTVPLHHPNR DSDVDNGCGG QGTGPQADED LEPFHANHEQ EGCDGRQEPQ SSQGETTWSE  180
EGGSQGVART RKRGDWAHLD TMALIRAKGD RHVARAVNYE DIGNGRTSKK AWEEIAKVLA  240
IVGMRKTWLE CQTRWRSIWA TYRQVTTLHK GSGIQSYWRM TSAERQEKGF NFILHKDWFD  300
LLEVYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.13e-06Trihelix family protein