PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG69972.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

bHLH

Protein Properties

Length: 1239aa MW: 127043 Da PI: 4.6986

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG69972.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	20.1	1.2e-06	617	644	5	36
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapsk 36 h+++Er RR++i +++ L++l+P+a +k GBG69972.1 617 HSIAERMRREKIAERMKSLQDLVPNA----NK 644 99***********************8....34 PP

Sequence ? help Back to Top
Protein Sequence Length: 1239 aa Download sequence
MSVCGGDSLG GVSSSSGAES SSSDFESGST CYLDSSLPTQ KSLESQSQTQ CSSHTSKASR 60 DFTPLSSLDP RISSPFKLTA AKSVSGGGVM PTLSAHEGSG GGPQLLMPPS LQQSLSLPPC 120 VLHSASLEFD VLDQLFGSSS WADASAGPGR MLWKPPCSLP SSKEEMFSRS RSDQEALQTE 180 AVDEGDGTLM KVVQGCGGGG GGSMGGGTSI GSQTGLATDD QLTAMRGTVG GGTSVSAPSA 240 TMGSQVEPLS PAAGRRGSGS HMMSASPRLL ALQRSGSMAS SIPASPSTIS TTSWSSPGPS 300 LSGRTGMSLM ATMSEGRMGG SAASSVTSSS VGLSALGSQE SSNSPGGTDV IVATHPVSTA 360 PMPLTTTSGW GSGSTQPHMS VLSSMPSLAL GGHPSHVARP AQAPKWKHPP PGAVRDNYVG 420 AIPVGIGGTV GALAIGSTIA GGALPAMPHA DWGVAAAIPL STKQMDKGGD GQARGSLLGK 480 RGRMPAGIED LEAKSSEKRL LPTAAAAALQ SSLLGQQHML PAALQAAPQA VFSAEIVQQA 540 QQQQRHELES KVLQGSPFTP GPALPSPEGH IGQSQIPILS SAAAGTMAGT SLPGAGFFEQ 600 HMKPRARARR GQATDPHSIA ERMRREKIAE RMKSLQDLVP NANKILSMSR GGAESRSLIA 660 DLPFEGLATK TTAALAARAM QLGFTGSGLL SGGAQAAAAQ GGCGITHDEL LLIEQHVASI 720 MNEDVGTAMQ TLHGKGLCLV PLSVATAINL GAIPLRAMGG GGPSTSGPSG QPQAAAESHD 780 PASLQPEVGG LGIRPSGGLS RSQPGESGRN NDTSSSDEEG GEGVGTLSTG SKRLSAAAAA 840 IGGGSTGLGP SPYRPAGGST SSGGAAGAAG ALGYITAGGP EGCGGAVTGL GILPDTLHAS 900 PIPSSAVVAD AALIPLGAGF TELSQIAGAV QRQHTPQMQA TAQVQPQPGP PPQQQPQQQD 960 KIVRELTIVI ARLADELPLD IVSQSDEEPV PHVLSRTLAP SLQWSACIEE RWADGRFPSR 1020 SKYLDVHNLT NPRFFRQPTA FEWAALRGEE EAEEESEGEL RREAEEAATR LAEDEEEEAA 1080 EAEDEEEEEE EGETSEEEEE AYSEHSEGEQ SEEEEDEDGD EGVESGEDDR EPAHDDELEW 1140 VPKLDCREEN LEAAAQHKKE VVEGKRPVID HIPNDPSKDP EPPKPEHGDL AATTSSAATT 1200 RRRPRSRSSS PSASARPPIR RRVDEGLRPS SPIHIPPSP

Sequence ? help Back to Top

Protein Sequence Length: 1239 aa Download sequence

MSVCGGDSLG GVSSSSGAES SSSDFESGST CYLDSSLPTQ KSLESQSQTQ CSSHTSKASR  60
DFTPLSSLDP RISSPFKLTA AKSVSGGGVM PTLSAHEGSG GGPQLLMPPS LQQSLSLPPC  120
VLHSASLEFD VLDQLFGSSS WADASAGPGR MLWKPPCSLP SSKEEMFSRS RSDQEALQTE  180
AVDEGDGTLM KVVQGCGGGG GGSMGGGTSI GSQTGLATDD QLTAMRGTVG GGTSVSAPSA  240
TMGSQVEPLS PAAGRRGSGS HMMSASPRLL ALQRSGSMAS SIPASPSTIS TTSWSSPGPS  300
LSGRTGMSLM ATMSEGRMGG SAASSVTSSS VGLSALGSQE SSNSPGGTDV IVATHPVSTA  360
PMPLTTTSGW GSGSTQPHMS VLSSMPSLAL GGHPSHVARP AQAPKWKHPP PGAVRDNYVG  420
AIPVGIGGTV GALAIGSTIA GGALPAMPHA DWGVAAAIPL STKQMDKGGD GQARGSLLGK  480
RGRMPAGIED LEAKSSEKRL LPTAAAAALQ SSLLGQQHML PAALQAAPQA VFSAEIVQQA  540
QQQQRHELES KVLQGSPFTP GPALPSPEGH IGQSQIPILS SAAAGTMAGT SLPGAGFFEQ  600
HMKPRARARR GQATDPHSIA ERMRREKIAE RMKSLQDLVP NANKILSMSR GGAESRSLIA  660
DLPFEGLATK TTAALAARAM QLGFTGSGLL SGGAQAAAAQ GGCGITHDEL LLIEQHVASI  720
MNEDVGTAMQ TLHGKGLCLV PLSVATAINL GAIPLRAMGG GGPSTSGPSG QPQAAAESHD  780
PASLQPEVGG LGIRPSGGLS RSQPGESGRN NDTSSSDEEG GEGVGTLSTG SKRLSAAAAA  840
IGGGSTGLGP SPYRPAGGST SSGGAAGAAG ALGYITAGGP EGCGGAVTGL GILPDTLHAS  900
PIPSSAVVAD AALIPLGAGF TELSQIAGAV QRQHTPQMQA TAQVQPQPGP PPQQQPQQQD  960
KIVRELTIVI ARLADELPLD IVSQSDEEPV PHVLSRTLAP SLQWSACIEE RWADGRFPSR  1020
SKYLDVHNLT NPRFFRQPTA FEWAALRGEE EAEEESEGEL RREAEEAATR LAEDEEEEAA  1080
EAEDEEEEEE EGETSEEEEE AYSEHSEGEQ SEEEEDEDGD EGVESGEDDR EPAHDDELEW  1140
VPKLDCREEN LEAAAQHKKE VVEGKRPVID HIPNDPSKDP EPPKPEHGDL AATTSSAATT  1200
RRRPRSRSSS PSASARPPIR RRVDEGLRPS SPIHIPPSP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58010.1	2e-28	bHLH family protein