PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG69846.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 491aa    MW: 53944.6 Da    PI: 5.3045
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG69846.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix31.35.5e-10238314270
    trihelix   2 WtkqevlaLiearremeerlrrg.......klkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekk 70 
                 W  +e l+L++ +r++++ + ++       k k  +W e++k+m+++g+ +r    C ++wen+ + y k  ++ek+
  GBG69846.1 238 WHLDESLVLVRCKRDLDDYMASQgsnfarmKTKTWKWNEIAKRMAQQGVtNRDGDSCMKRWENIFGWYIKFWDREKN 314
                 99************777666643222222279999***********999899****************999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 491 aa     Download sequence    
MQPLPDDEWV PPPSTLPLAW GATQTSYESG GRSGDCGNGM GPMSTLLTGG RGAGGDPLQL  60
HLSSTCTMDA SRTVLVEHNS RSQGGVSVTM QEAREDRLQT QWPPRSSSAC TSSHSRPPTF  120
STPVSNGVSH TVLNGRVTTA IAAESPRVIE RIIARYSRMR TDVEREDGGD ANADGEDVAE  180
ECMDGNDESE EDDEPAVKEV TSKGGKKKAS KSRGRSKARE EGGGAYGESG GGSMRQNWHL  240
DESLVLVRCK RDLDDYMASQ GSNFARMKTK TWKWNEIAKR MAQQGVTNRD GDSCMKRWEN  300
IFGWYIKFWD REKNSGVQSF FLLTSKKCEE LEFTFAMDQQ LYDAIHATTP NNHAIHPPNL  360
LDTDGLPPQQ PNEGEADGQA RGSAVVGETS ASDNIDSAVG DGYGNKSSGR PTPLPRLTSF  420
PSRWKMNNRN EKIKVICRKQ EVREEEKKIE FIQTEMTIGL SSSDCKNKPQ ETNSTPSTSF  480
PLPPSPPEWL Q