PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG69788.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Nin-like

Protein Properties

Length: 839aa MW: 84969 Da PI: 7.1429

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG69788.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	73.3	3.1e-23	773	819	3	49
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRki 49 ei+l +ls+yF++pi+ A+keL+v+lTvLK++CR++ I+RWPhRk+ GBG69788.1 773 TEITLAELSRYFHMPITMASKELKVGLTVLKKRCRELKIPRWPHRKV 819 68********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 839 aa Download sequence
MMLARNADVV YTRRLAEDLN SANQDLTEAS NSPDPASTTT SNTSQLEVAS VGSPAPPPLR 60 SSGPVKAEPS ASSFSPSALN GSCDEFQSLG SQPQGPSQSQ THTLCGQSRL LCSQPPDLKA 120 ETSNFGRGGG GGGGGGGGGG GGLATAALSS SVSSQTWSGT SIMAVGNLPS SWAEQTEDWA 180 PGPGVHVVGQ HVGGGASCGS AMASGGPDDV HMPGGGMTVD LETSAEINPC TGTVDHLMGT 240 TSWGEMDFAS MQPLLAALLS GPSSGVNAIF GKKMPFTQPL QDPSCGGGGD DGASSPSMML 300 HHSNGHHHHH PHNAPMAIPL ASIPRSAPAN GMLPLHHVHP TSTSSSGDTS SPRGSALGTA 360 SDLPLFHIPT SAPASHTPSS LALPLDHQSS SRSEVSSSAL TAAARRDAAA AANPQNHPLF 420 SHHLANILGR LGSQPANLSA ALTASLSDRL ASTSGDSCAA DCGGPHHLAA LGGAQHFLHA 480 PRSFGGLGGS GGEGGGGGTG GEGGGGGGGG GGGGGGGCGD AFDLPVVPVA ARFGIGASCW 540 ASQAHSQANS RPGEGGGDSI EHAPAHLLPP STSACHMSRA SALMTHQHSS VLALNHQRAQ 600 LEGCGPAKLF TSSSIDRDSA DLSPDSANTP HAASDHLHHH HHHHHHHHPQ AHSMPPHLHF 660 SALAAASPPP APLPTSHHSH PHQHHPGSLL LDGHLASYPR LLSLGVNVKP EPCHGSPLGP 720 CSDISTHAGH GGGSTFPTTS GRFAAAKGLG GTITSSSHHN TKSNPTRPSE RMTEITLAEL 780 SRYFHMPITM ASKELKVGLT VLKKRCRELK IPRWPHRKVG FPLRCGAAQL LARIYLFSI

Sequence ? help Back to Top

Protein Sequence Length: 839 aa Download sequence

MMLARNADVV YTRRLAEDLN SANQDLTEAS NSPDPASTTT SNTSQLEVAS VGSPAPPPLR  60
SSGPVKAEPS ASSFSPSALN GSCDEFQSLG SQPQGPSQSQ THTLCGQSRL LCSQPPDLKA  120
ETSNFGRGGG GGGGGGGGGG GGLATAALSS SVSSQTWSGT SIMAVGNLPS SWAEQTEDWA  180
PGPGVHVVGQ HVGGGASCGS AMASGGPDDV HMPGGGMTVD LETSAEINPC TGTVDHLMGT  240
TSWGEMDFAS MQPLLAALLS GPSSGVNAIF GKKMPFTQPL QDPSCGGGGD DGASSPSMML  300
HHSNGHHHHH PHNAPMAIPL ASIPRSAPAN GMLPLHHVHP TSTSSSGDTS SPRGSALGTA  360
SDLPLFHIPT SAPASHTPSS LALPLDHQSS SRSEVSSSAL TAAARRDAAA AANPQNHPLF  420
SHHLANILGR LGSQPANLSA ALTASLSDRL ASTSGDSCAA DCGGPHHLAA LGGAQHFLHA  480
PRSFGGLGGS GGEGGGGGTG GEGGGGGGGG GGGGGGGCGD AFDLPVVPVA ARFGIGASCW  540
ASQAHSQANS RPGEGGGDSI EHAPAHLLPP STSACHMSRA SALMTHQHSS VLALNHQRAQ  600
LEGCGPAKLF TSSSIDRDSA DLSPDSANTP HAASDHLHHH HHHHHHHHPQ AHSMPPHLHF  660
SALAAASPPP APLPTSHHSH PHQHHPGSLL LDGHLASYPR LLSLGVNVKP EPCHGSPLGP  720
CSDISTHAGH GGGSTFPTTS GRFAAAKGLG GTITSSSHHN TKSNPTRPSE RMTEITLAEL  780
SRYFHMPITM ASKELKVGLT VLKKRCRELK IPRWPHRKVG FPLRCGAAQL LARIYLFSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35590.1	3e-16	Nin-like family protein