PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG69666.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Nin-like

Protein Properties

Length: 1025aa MW: 102967 Da PI: 5.4221

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG69666.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	75.9	4.6e-24	837	883	2	48
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 + +++++dl+k+F+lpi++AAkeLg+c+TvLK+iCR++G++RWPhRk GBG69666.1 837 TGKLRMSDLAKHFHLPINAAAKELGICPTVLKKICRRNGMRRWPHRK 883 56899*****************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 1025 aa Download sequence
MPAERNLRIS SYDQLEQSIQ RSSGSHPHQQ QLQQQQQQQL LHHHRLLVYQ SGLSSSIREI 60 TSFVDGSGSH QHDEGLLIVD GYSSLSGSNQ EGRRETSESM EADNAEPGEE LGGQIGVGGE 120 GGGGGDGGGG GGGGGGGGGE GGGGGGTDCP LSPCAAKHEQ PGGQTCLELE SGGEEGEDGG 180 CGGGGGGGGG GGEGDEIPTL DSAEIMDQAE SNASPRMLEN SNEVAGDMCH ALFGQRTGNL 240 EAGVGRGGEG GGDLSAVVSR GHVAAATHYT SRTTSTAAMQ FRCQSGTDLD LTVGSVFQTG 300 MDAGDPSESL MMTATRMRGG QPRGALAIAG GGGLGAGVGG GRGGAREADA IESSLAMVGN 360 SSAAHSPGFQ AMSMFHHAPP PTSPPPPGVP LSSSQQQQQV SFFPFNITIP YPPNPPTGSQ 420 IFKSCSTMAG TAYGTHAGVG GGAGGGGGGG AGGGGGVGAG GGSPGGILLS SSSLLTATAV 480 DHLPPITLGQ TSSMLTATTT GNFLFGGMDN GDMASMAGSM GGGGGGGGGG GGGGGGGEAI 540 SLMGVGGSCY GSGSGSVPDR LIHEIATASG AIAAASAALG ATSAAMAAAN RGYNIGGVVG 600 GAGGSGSWLL GTDWSTPRFD GGVGGGGCPI SPKPEMGQCA GCQIVRKIIH SNGIQDTKLE 660 IHSCDEQSYH AVLQTRFSVD DGFAGSIEQQ MVEFPMGNTE YLKQFLLQYS LLRRKEGFVP 720 RYDSLSASDL VSDLTTSQRL SRPAKQIGLS DLLQTPMVSG ITITGSDFAT NDGSIGREGS 780 CSAELPRASS LESACTTVAM TPPGRTAGPL SQSTTASGPS SSPSPMKSTA AAQREKTGKL 840 RMSDLAKHFH LPINAAAKEL GICPTVLKKI CRRNGMRRWP HRKSVENGRN GRNGKCVESE 900 MGLERTKQGQ ERSHRSESEV CNGSRGLGEV FKCLDRQQEG VFGSLGQIDD ESKANCKGLG 960 QVDDGSKANC KGLGXGLGQV DDGSKANCKG LGQVDDGSKA NCKGLGQRQG GSSMVFVKEK 1020 QDAEC

Sequence ? help Back to Top

Protein Sequence Length: 1025 aa Download sequence

MPAERNLRIS SYDQLEQSIQ RSSGSHPHQQ QLQQQQQQQL LHHHRLLVYQ SGLSSSIREI  60
TSFVDGSGSH QHDEGLLIVD GYSSLSGSNQ EGRRETSESM EADNAEPGEE LGGQIGVGGE  120
GGGGGDGGGG GGGGGGGGGE GGGGGGTDCP LSPCAAKHEQ PGGQTCLELE SGGEEGEDGG  180
CGGGGGGGGG GGEGDEIPTL DSAEIMDQAE SNASPRMLEN SNEVAGDMCH ALFGQRTGNL  240
EAGVGRGGEG GGDLSAVVSR GHVAAATHYT SRTTSTAAMQ FRCQSGTDLD LTVGSVFQTG  300
MDAGDPSESL MMTATRMRGG QPRGALAIAG GGGLGAGVGG GRGGAREADA IESSLAMVGN  360
SSAAHSPGFQ AMSMFHHAPP PTSPPPPGVP LSSSQQQQQV SFFPFNITIP YPPNPPTGSQ  420
IFKSCSTMAG TAYGTHAGVG GGAGGGGGGG AGGGGGVGAG GGSPGGILLS SSSLLTATAV  480
DHLPPITLGQ TSSMLTATTT GNFLFGGMDN GDMASMAGSM GGGGGGGGGG GGGGGGGEAI  540
SLMGVGGSCY GSGSGSVPDR LIHEIATASG AIAAASAALG ATSAAMAAAN RGYNIGGVVG  600
GAGGSGSWLL GTDWSTPRFD GGVGGGGCPI SPKPEMGQCA GCQIVRKIIH SNGIQDTKLE  660
IHSCDEQSYH AVLQTRFSVD DGFAGSIEQQ MVEFPMGNTE YLKQFLLQYS LLRRKEGFVP  720
RYDSLSASDL VSDLTTSQRL SRPAKQIGLS DLLQTPMVSG ITITGSDFAT NDGSIGREGS  780
CSAELPRASS LESACTTVAM TPPGRTAGPL SQSTTASGPS SSPSPMKSTA AAQREKTGKL  840
RMSDLAKHFH LPINAAAKEL GICPTVLKKI CRRNGMRRWP HRKSVENGRN GRNGKCVESE  900
MGLERTKQGQ ERSHRSESEV CNGSRGLGEV FKCLDRQQEG VFGSLGQIDD ESKANCKGLG  960
QVDDGSKANC KGLGXGLGQV DDGSKANCKG LGQVDDGSKA NCKGLGQRQG GSSMVFVKEK  1020
QDAEC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38340.1	8e-10	Nin-like family protein