PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG69615.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

G2-like

Protein Properties

Length: 1261aa MW: 134362 Da PI: 6.5014

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG69615.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.4	1.4e-32	303	357	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWtpeLH+rFv+av++LGG+ekAtPk +l++m+v+gLt+ hvkSHLQkYR+ GBG69615.1 303 KQRLRWTPELHDRFVDAVDELGGAEKATPKGVLKVMNVQGLTIFHVKSHLQKYRM 357 79****************************************************8 PP
2	Myb_DNA-binding	49.3	1.2e-15	305	356	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e+++++vdav +lGg t+k + + m+ +g+t ++ks++qky+ GBG69615.1 305 RLRWTPELHDRFVDAVDELGGAekaTPKGVLKVMNvQGLTIFHVKSHLQKYR 356 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 1261 aa Download sequence
MPQPESSRVS AADPLASARC ADSSPSPPPS CWSPSPSAAA AAAGVASSDP DVGGRPRGGG 60 EVIGGGGEDG SSRNCGVDGE EFVPAASSAA AAAVSAGDAS SPFRCASSPG CGGDRSQSLV 120 PIPPQHRCLL QTSAPDEAPG PVLGEEMASL ADVSDSGHPA LPTSSTQTSA AGNDDSASLD 180 TDVVAHSEWP TWWEFYPEAH ALEPVWAELL NVSQMEADDG EEEEQRGVEG GGGATVNNVS 240 QHHSSNTSVF QESEKAMSGV DGATVTRDKT GGERHRVPGG GRSLIPGMPA GPLSPGAGVA 300 NGKQRLRWTP ELHDRFVDAV DELGGAEKAT PKGVLKVMNV QGLTIFHVKS HLQKYRMAKF 360 MPEQQVMPND NEDSGAVCSS FGAAGSPGKG DGKVKGKTAT ELTAPQDPSR KCQTQDLKNH 420 LNVQKKLHEQ LELQRQLQMK VQATGKHLHM ILKQYRILCA QTERTQRELA RSSNGDAPLP 480 KGSSDVLRPS GSADGSSSGG QGGSLSAMGG SMMPMNIVEE GDSVNAAMSL PVCCSHSQLS 540 SQLSPVDEQA GGQFVQASQN DYTSFINSAE PSYSQQNQAI PMLEDDLFTQ EQRLPKQCHC 600 QQHESPPSVY YPTEQQSLRG QSQQQYENSQ GGGPRTKAKY HHHNCGYQVP LQALSGKNQA 660 MGVTQQQQQQ QQQQQEQQQQ QQQQQQQQQQ QQQQQVTENH RECEVVCLPS ARAVISSAPG 720 RCDHVCVSQL KRLKHDNVQG MPSSVPSGQG LGSGLSRRTV YYQQQLTSSM MPTLDNSIPP 780 LYNGGASHHQ QDGSNMQVPV GVEELDEDPS LLAYAGSGSF LGAAEHRICA MDAAATTMGV 840 GRVEMTGPMG LVPECQTITR GLENHATEGS GAGMGRVCVT CAPGCSLHHH HTQHVSAPIS 900 SCQTCRTSHI QHPPLHQPKG GVKRKPAPTM AVMNPSQPSS AQCSFPCRQH QSCLQHQQQQ 960 QQQQQQQQQQ QQQLLQPNFG TGSALSTSER GGEGRGQFNR HSVPPVSSAQ QRKQQHNQQS 1020 QPQQQAQLRN EPLHDQRPQS RSSAGANLQQ PQHVHAAGSY GLGSSPQLMA SGITTFYRTH 1080 SRGDDDRPCA SPKESACQQF SSGTRSQRMM AQGDEHGHVN CSPASGSEVG ELRGELRDFS 1140 GSMDLSESMA TKDIREAAND GIGLQRMDCT TGAAAAQSGD YSSPCFGENR WSVGRCADRA 1200 RAPSLRDSSA SSNERKFAGI VPVDCGCGAP RSFGRENDLP DRPSSQALVN AEVRYHKARL 1260 A

Sequence ? help Back to Top

Protein Sequence Length: 1261 aa Download sequence

MPQPESSRVS AADPLASARC ADSSPSPPPS CWSPSPSAAA AAAGVASSDP DVGGRPRGGG  60
EVIGGGGEDG SSRNCGVDGE EFVPAASSAA AAAVSAGDAS SPFRCASSPG CGGDRSQSLV  120
PIPPQHRCLL QTSAPDEAPG PVLGEEMASL ADVSDSGHPA LPTSSTQTSA AGNDDSASLD  180
TDVVAHSEWP TWWEFYPEAH ALEPVWAELL NVSQMEADDG EEEEQRGVEG GGGATVNNVS  240
QHHSSNTSVF QESEKAMSGV DGATVTRDKT GGERHRVPGG GRSLIPGMPA GPLSPGAGVA  300
NGKQRLRWTP ELHDRFVDAV DELGGAEKAT PKGVLKVMNV QGLTIFHVKS HLQKYRMAKF  360
MPEQQVMPND NEDSGAVCSS FGAAGSPGKG DGKVKGKTAT ELTAPQDPSR KCQTQDLKNH  420
LNVQKKLHEQ LELQRQLQMK VQATGKHLHM ILKQYRILCA QTERTQRELA RSSNGDAPLP  480
KGSSDVLRPS GSADGSSSGG QGGSLSAMGG SMMPMNIVEE GDSVNAAMSL PVCCSHSQLS  540
SQLSPVDEQA GGQFVQASQN DYTSFINSAE PSYSQQNQAI PMLEDDLFTQ EQRLPKQCHC  600
QQHESPPSVY YPTEQQSLRG QSQQQYENSQ GGGPRTKAKY HHHNCGYQVP LQALSGKNQA  660
MGVTQQQQQQ QQQQQEQQQQ QQQQQQQQQQ QQQQQVTENH RECEVVCLPS ARAVISSAPG  720
RCDHVCVSQL KRLKHDNVQG MPSSVPSGQG LGSGLSRRTV YYQQQLTSSM MPTLDNSIPP  780
LYNGGASHHQ QDGSNMQVPV GVEELDEDPS LLAYAGSGSF LGAAEHRICA MDAAATTMGV  840
GRVEMTGPMG LVPECQTITR GLENHATEGS GAGMGRVCVT CAPGCSLHHH HTQHVSAPIS  900
SCQTCRTSHI QHPPLHQPKG GVKRKPAPTM AVMNPSQPSS AQCSFPCRQH QSCLQHQQQQ  960
QQQQQQQQQQ QQQLLQPNFG TGSALSTSER GGEGRGQFNR HSVPPVSSAQ QRKQQHNQQS  1020
QPQQQAQLRN EPLHDQRPQS RSSAGANLQQ PQHVHAAGSY GLGSSPQLMA SGITTFYRTH  1080
SRGDDDRPCA SPKESACQQF SSGTRSQRMM AQGDEHGHVN CSPASGSEVG ELRGELRDFS  1140
GSMDLSESMA TKDIREAAND GIGLQRMDCT TGAAAAQSGD YSSPCFGENR WSVGRCADRA  1200
RAPSLRDSSA SSNERKFAGI VPVDCGCGAP RSFGRENDLP DRPSSQALVN AEVRYHKARL  1260
A

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	53	60	GGRPRGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	4e-29	G2-like family protein