PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG69382.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 411aa    MW: 43122.9 Da    PI: 6.9715
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG69382.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix28.63.6e-0963141479
    trihelix   4 kqevlaLiearremeerlrrgk....lkkplWeevskkmrergfer.spkqCkekwenlnkrykkikegekkrtsessstc 79 
                 ++ vlaLi+a+r   ++ + +     +  ++W+++ ++m++ g     +++ ++kw+nl + y+k+ke ek   ++++s +
  GBG69382.1  63 HEVVLALIRAKRAELSSPQGSTtrmlSGSARWAAIVDVMAAAGHPGmDSEKLRKKWNNLVQTYRKVKEYEKL--PGVKSYW 141
                 5679********98888885433344889************9995549********************9997..5555555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 411 aa     Download sequence    
MSSSSGESEE DGRLAVQAGT DALNLAAMAT ATTATTGTTT TTSRKRGLAS PGGPSRRAPA  60
LAHEVVLALI RAKRAELSSP QGSTTRMLSG SARWAAIVDV MAAAGHPGMD SEKLRKKWNN  120
LVQTYRKVKE YEKLPGVKSY WDLTPAEKKE KGIEVYINQP TFMAMAEFMA ERDAMNLHAN  180
NNGGMAANSN PIRDLACVPS TRSNGAGGGV MHDVEEDGGE DGEGEGEGGG VSHGNVPGTP  240
SRGAPGNDTD GAVNSGKKSR TQSMAASVEG LTHAYVHGSE QFIAAMRDGS VTMGNSMDLQ  300
TVAMRDSARE VAAAIRDSGR ELAASLAGLA ASLAASRQAN YHPLPHPPPP PAHHHHQPAP  360
PPPPPQFNTT PEYGGAPQHH TVRRTQIFQS GNEGVCNPHV PTEWQTPSQA L