PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG69020.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 318aa    MW: 35567.7 Da    PI: 10.1155
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG69020.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix32.13.1e-10173248270
    trihelix   2 WtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 
                 W+ ++  + ++a+r+ + +l+++         ++ +W++v +++ + g+  s+ +C +kw+nl +++kk+ + +++
  GBG69020.1 173 WSVDHMITFMRAKRDQDAQLQASGrayarmrTREWKWADVWERLLKVGVDQSADKCGKKWDNLMQQFKKVHNFMRE 248
                 9999*****************863344444499************************************9987776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MRGDDNGRAV DLTFTLGSTS SSATTRTVLV NPYPDDDAGQ VNTSQGVSRG VLRWQETTDA  60
GRERAMSTMP SAQEMRRQRE DSIMQGVQRL SVGGRGAGET GVGGGVALAD DGEGDWSQPE  120
ENTEAFPMRP PNMDRRGGRR RTAMAPDHRR RKGVAGVANG DGDVDGDGGR NFWSVDHMIT  180
FMRAKRDQDA QLQASGRAYA RMRTREWKWA DVWERLLKVG VDQSADKCGK KWDNLMQQFK  240
KVHNFMRESG KEDFLFTKEQ RAEKGFNFTM ERAVYDEIKG ATEKRHTINP TNVANTGIVP  300
ALPGVCIFRR RRPQHQSL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1308313FRRRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.16e-07Trihelix family protein