PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG68887.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 875aa MW: 94823 Da PI: 6.8374

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG68887.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	27	1.1e-08	260	335	2	69
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegek 69 Wt ++ +L++a+r ++++++r k k +W+++ +++ + g+ +r+ C++kw+nl +++k + + ++ GBG68887.1 260 WTVEHMITLVRAKRdqdlhlaGLGHNMGRMKTKTWKWADIESRLVQMGVtSRKVDDCRKKWDNLYMQFKIVHKFMG 335 999*********77777777778888999*********99999799***************9877655 PP

Sequence ? help Back to Top
Protein Sequence Length: 875 aa Download sequence
MADLCRRLPL LLLVAVLLLA VVVFHICILG RVPGRKQRRR TTKATGKMEK VQTKRTMSVG 60 AGGSSRQRCS SAEGGRQSYG PTLYSHLSSH EIPLPPSDDD SDDPRSSTVP LGSVGTTGVR 120 ASGTRTGGST TAAGAVHRGR DDDDGYAAEV VGREVWDDYR RQSCQSSTSA IMRGVAKINV 180 GADDTPGDCD GAGGEDCSAG DGGNDNDRDD DGEMEIRPVG KKRGGPRATS KSSEPRTGRR 240 GKKSAGDASA GDGAISRDFW TVEHMITLVR AKRDQDLHLA GLGHNMGRMK TKTWKWADIE 300 SRLVQMGVTS RKVDDCRKKW DNLYMQFKIV HKFMGESGET DFFTLTPRER KERGFDFRMD 360 ERVYSEMKAM SRGDHTIHPT NLADTGAAGG RPGGWNDSGS SDRCGDGQDD DQGSKRNSSF 420 SSGSAGGCGK RKNVRQQTFD TIADVMKEHG SLMATTVDNA SKRQCSILTR QCDILERELE 480 VQKKHYVKQE EVLMVDAQGT SAAARLGFGR DGVSKEQLSA LKQSIAVGAA GASQRTPKAA 540 GVVITEVRVP RQLPAAAGQG QPRLALPLQQ VGASGGGKAQ SAQKGDATAI DTRMAAADHS 600 CRSRVAEXAT EERVDBVRXD DGRRDGKREG DDDDDRPPCD EVEGSRKGGW SGGEIEVVES 660 YISVNIATDV ARAVWQGQEW SNVVSPALVY HTLAMKMVVP LWFAGVIVDR PEDDDMAAWQ 720 EATVLRVVEC WTDALWCGQW ADGGRVKQER LSRLADCLRA LLSACMWIMR MGGDDDRSHY 780 EACLYSSMVA KPTMIAAGSY IFNWRRHIVD SANLVLDRIG KAHLTLGEYP HCIPEWCDCG 840 LVFGHNAALK NTAEAAKHGW IGSGPAAEEE GNEDG

Sequence ? help Back to Top

Protein Sequence Length: 875 aa Download sequence

MADLCRRLPL LLLVAVLLLA VVVFHICILG RVPGRKQRRR TTKATGKMEK VQTKRTMSVG  60
AGGSSRQRCS SAEGGRQSYG PTLYSHLSSH EIPLPPSDDD SDDPRSSTVP LGSVGTTGVR  120
ASGTRTGGST TAAGAVHRGR DDDDGYAAEV VGREVWDDYR RQSCQSSTSA IMRGVAKINV  180
GADDTPGDCD GAGGEDCSAG DGGNDNDRDD DGEMEIRPVG KKRGGPRATS KSSEPRTGRR  240
GKKSAGDASA GDGAISRDFW TVEHMITLVR AKRDQDLHLA GLGHNMGRMK TKTWKWADIE  300
SRLVQMGVTS RKVDDCRKKW DNLYMQFKIV HKFMGESGET DFFTLTPRER KERGFDFRMD  360
ERVYSEMKAM SRGDHTIHPT NLADTGAAGG RPGGWNDSGS SDRCGDGQDD DQGSKRNSSF  420
SSGSAGGCGK RKNVRQQTFD TIADVMKEHG SLMATTVDNA SKRQCSILTR QCDILERELE  480
VQKKHYVKQE EVLMVDAQGT SAAARLGFGR DGVSKEQLSA LKQSIAVGAA GASQRTPKAA  540
GVVITEVRVP RQLPAAAGQG QPRLALPLQQ VGASGGGKAQ SAQKGDATAI DTRMAAADHS  600
CRSRVAEXAT EERVDBVRXD DGRRDGKREG DDDDDRPPCD EVEGSRKGGW SGGEIEVVES  660
YISVNIATDV ARAVWQGQEW SNVVSPALVY HTLAMKMVVP LWFAGVIVDR PEDDDMAAWQ  720
EATVLRVVEC WTDALWCGQW ADGGRVKQER LSRLADCLRA LLSACMWIMR MGGDDDRSHY  780
EACLYSSMVA KPTMIAAGSY IFNWRRHIVD SANLVLDRIG KAHLTLGEYP HCIPEWCDCG  840
LVFGHNAALK NTAEAAKHGW IGSGPAAEEE GNEDG