PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG68739.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 786aa MW: 84545.9 Da PI: 8.9918

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG68739.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	33	1.6e-10	276	352	2	70
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekk 70 Wt ++ aLi+a+r+++++l r k k +W +v k++ + g+ +r+++ C +kw+nl +++k + + +++ GBG68739.1 276 WTVEHMIALIRAKRDRDSHLAglahttgRMKTKTWKWGDVEKRVVQMGVtSRKAVDCGKKWDNLYQQFKTVHKFMGE 352 ************999998866554334579999999**99999899***************99876665 PP

Sequence ? help Back to Top
Protein Sequence Length: 786 aa Download sequence
MVEKYVFCKH PPAASCEIAS ISFVGIFPLA LLVSVRRACH SASASFVSAI LSFMADLYCR 60 RPLLLLAVVL LLAVVVFHIC CLVRVPGRKQ TRQTSKTARK MERVQMRTTL SVGAAGSLRQ 120 RCRSAEAVRR PYDPAQYSHL PSHEIPLPPS DDDGDDPRCS TLPLGRGSTQ DWMGSQLHRQ 180 ASTPTYTDLL EGCTPAGYDP GLVDLGFGLR SGIGEDCEAD DGAGDDDEEM EIRPVGRKRG 240 GSRAAKKLXE TRTGRKGKKG VEDASVGEGS KSRDFWTVEH MIALIRAKRD RDSHLAGLAH 300 TTGRMKTKTW KWGDVEKRVV QMGVTSRKAV DCGKKWDNLY QQFKTVHKFM GESGKPNFFT 360 LTPGERKERA FDFRMDECVY SEIAAMTRRD HTIHPTNLVD TGATGGVQMP GPSGGRIESG 420 GSDRGGDGHD DDQGSTRDSI SGGGVGGGSK RKNMPPRSAS ARGRKEGGVG DGGETNKGRG 480 HIPKLKRQRI DDASASQTDD FLADEVAMVD AQGTARVARL GFGRDGVSRE QMQGVKRSVV 540 GGAAGTVPRT PNTAGVVVTG ARVAGQLSTA AGQGQPRQPL PLQHVLASRG GHTTPTQKGD 600 ATASASRMAA ADHTAKAGVV EGAEDRPGVD DVGRDNGRRD RKREGNDCGQ WADGGRVKQE 660 RLSRLADSLR ALLCAVMWIM RMGGDDDRSH YEAWSYASMV AKPTMIAAGS YIFNWRRHVV 720 DSANLVLDRL GKAHLTLGDY QQCIPEWCDC GLAFGHNAAL KNAAEAAKHG WIGSGPAADD 780 DGDDGK

Sequence ? help Back to Top

Protein Sequence Length: 786 aa Download sequence

MVEKYVFCKH PPAASCEIAS ISFVGIFPLA LLVSVRRACH SASASFVSAI LSFMADLYCR  60
RPLLLLAVVL LLAVVVFHIC CLVRVPGRKQ TRQTSKTARK MERVQMRTTL SVGAAGSLRQ  120
RCRSAEAVRR PYDPAQYSHL PSHEIPLPPS DDDGDDPRCS TLPLGRGSTQ DWMGSQLHRQ  180
ASTPTYTDLL EGCTPAGYDP GLVDLGFGLR SGIGEDCEAD DGAGDDDEEM EIRPVGRKRG  240
GSRAAKKLXE TRTGRKGKKG VEDASVGEGS KSRDFWTVEH MIALIRAKRD RDSHLAGLAH  300
TTGRMKTKTW KWGDVEKRVV QMGVTSRKAV DCGKKWDNLY QQFKTVHKFM GESGKPNFFT  360
LTPGERKERA FDFRMDECVY SEIAAMTRRD HTIHPTNLVD TGATGGVQMP GPSGGRIESG  420
GSDRGGDGHD DDQGSTRDSI SGGGVGGGSK RKNMPPRSAS ARGRKEGGVG DGGETNKGRG  480
HIPKLKRQRI DDASASQTDD FLADEVAMVD AQGTARVARL GFGRDGVSRE QMQGVKRSVV  540
GGAAGTVPRT PNTAGVVVTG ARVAGQLSTA AGQGQPRQPL PLQHVLASRG GHTTPTQKGD  600
ATASASRMAA ADHTAKAGVV EGAEDRPGVD DVGRDNGRRD RKREGNDCGQ WADGGRVKQE  660
RLSRLADSLR ALLCAVMWIM RMGGDDDRSH YEAWSYASMV AKPTMIAAGS YIFNWRRHVV  720
DSANLVLDRL GKAHLTLGDY QQCIPEWCDC GLAFGHNAAL KNAAEAAKHG WIGSGPAADD  780
DGDDGK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	484	489	KLKRQR