PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG68312.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 577aa MW: 62164.1 Da PI: 6.4759

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG68312.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	40.3	8.5e-13	322	396	2	69
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 W+ + + aLi+a+r+ + +l+ r k ++ +W +v+ ++++ g+ r++ +C +kw++l +++kk+ + ++ GBG68312.1 322 WSVDDIIALIRAKRDQDAHLQgmghayaRMKPREWKWLDVATRLKKVGVDREADRCGKKWDDLMQQFKKVHHFQE 396 99**********777766643333336789999********************************987665 PP

Sequence ? help Back to Top
Protein Sequence Length: 577 aa Download sequence
MEGRKAISGS AGERGGRWSG HSPSNSRRPS ERTGHAHLPL HLQPLPDTDD EEGDDRRSGT 60 MPPGSGSTQE WATTELFGSR DGGKGQSYTE LLQQGLSDTD GDGGVNLSFG LGRGRSAAVS 120 RTVVVNPHPD DEGDDVTAVQ RSPRSPAPLR EASGNNKDPP RQQFRSSSVC GGASARPQWM 180 QSPSPLSASS SAGRPLGECR ETAPGVTDVG DARDGREVWA EQRQLMRSVR EESITHGVQR 240 LRVGEDGHDG EEAVGDAHDP DWNDNGAEGG EDDAGYISPS KQAAAMGGRG GKTKSCTGNG 300 RRGKRTAGRG SDADGEEGRH FWSVDDIIAL IRAKRDQDAH LQGMGHAYAR MKPREWKWLD 360 VATRLKKVGV DREADRCGKK WDDLMQQFKK VHHFQELSGK HDFFQLSGKD RMSKGFNFNM 420 DRAVYDEILG STAKNHTINS KNVADTGAQG GVRLPSASSA DPESVGDGDG GAVHDDDDDG 480 STKGSSQTTG GAGGFGKRKS TRQQTFEAMT ECMEKHGPLM ASMMESNSKH HCSIAIRQCE 540 ALEVEIEVQK KHYAGSDEVS KLMCHALLEI AKAIDKR

Sequence ? help Back to Top

Protein Sequence Length: 577 aa Download sequence

MEGRKAISGS AGERGGRWSG HSPSNSRRPS ERTGHAHLPL HLQPLPDTDD EEGDDRRSGT  60
MPPGSGSTQE WATTELFGSR DGGKGQSYTE LLQQGLSDTD GDGGVNLSFG LGRGRSAAVS  120
RTVVVNPHPD DEGDDVTAVQ RSPRSPAPLR EASGNNKDPP RQQFRSSSVC GGASARPQWM  180
QSPSPLSASS SAGRPLGECR ETAPGVTDVG DARDGREVWA EQRQLMRSVR EESITHGVQR  240
LRVGEDGHDG EEAVGDAHDP DWNDNGAEGG EDDAGYISPS KQAAAMGGRG GKTKSCTGNG  300
RRGKRTAGRG SDADGEEGRH FWSVDDIIAL IRAKRDQDAH LQGMGHAYAR MKPREWKWLD  360
VATRLKKVGV DREADRCGKK WDDLMQQFKK VHHFQELSGK HDFFQLSGKD RMSKGFNFNM  420
DRAVYDEILG STAKNHTINS KNVADTGAQG GVRLPSASSA DPESVGDGDG GAVHDDDDDG  480
STKGSSQTTG GAGGFGKRKS TRQQTFEAMT ECMEKHGPLM ASMMESNSKH HCSIAIRQCE  540
ALEVEIEVQK KHYAGSDEVS KLMCHALLEI AKAIDKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	1e-08	Trihelix family protein