PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG67959.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 985aa MW: 107146 Da PI: 9.0295

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG67959.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	33.3	1.3e-10	335	407	2	67
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikeg 67 W+ +e ++L++ +re e +l r + k+ +W +++k+m+ +g + + C +kw+nl + ykki+ GBG67959.1 335 WSTDEQMVLVRCKREQEAHLAglghnygRMRTKEWKWVDIAKRMANGGSPKDADDCMKKWDNLFQNYKKIQSF 407 ************77777664443333678************************************9865 PP

Sequence ? help Back to Top
Protein Sequence Length: 985 aa Download sequence
MADLQRRLPL LLLVVVVFLF VVFLHVCLSC RPWKQRRKRT ASMKRAVLQE ERPMAGMKAR 60 AILPAAEGGR RPATTEPSWR YDPSMYSHLP SWETPLPPSD EEPKGDELPT FPLASGSTQL 120 LSQTVLVGGS ASNERGEYTS LLQQGLGDDD DGGVDLRFGL SSGGAREASR TVITAAHASA 180 CGLQQPRREQ TGPSTVRGGA SVVGGVGSSP AAWQHVSGAP SGERLTDNWD VRTAAATAPP 240 AGSGASVENI TRGVSNMRAH SDGGDDDGCG GDDADDGFRE EVEAGDDDDD NAVLPVGKTG 300 GRGIGRNNRG GRGRSVGRGG RGGVTDDGGK SATYWSTDEQ MVLVRCKREQ EAHLAGLGHN 360 YGRMRTKEWK WVDIAKRMAN GGSPKDADDC MKKWDNLFQN YKKIQSFSPR SNLAALRRPS 420 RHKASRCKAS RRGAISSRYV ALLTVKLLAV KLLAVKLLAA VPALPTVNLF AVKRHRRKAK 480 GRRHIPKSKK VRSGEASGNV PARGSEGWAA AAEMESDDDF GMEEPQAEAT ASTVRQSARQ 540 RAFDHIAPKR MLPPAPEAQQ ARGRDARKDK AAVVVAEGDD DETLERRRQR NLAQDSASLL 600 MTTRLPEKEV VPERHAIEGE AAGAAGGTAT MNSAPVATAR EEAPAAATAR EDARSENTTD 660 REGGDVGPSR VRKETMSREL IDRALLWVDD KAFRTTGEGQ RLYNIIHETR EYFVAIASGL 720 PTTAVSRSVI LPKSSTRVAR ISDPSQLQQA ISRAAKVENV ALRVLHGWVF KSGNRARGYN 780 LAYQYALESV ATDIARAIWY AENWSNVVSA PICGHTIDLN MDLPLWFDVA HIDDRPDDDD 840 MAAYQESTVI FIAQAFRAAV LMGAHIDGDF ISYDRLCRVA DCFRLLLAAT IWIMCMAGDD 900 FRSHYEAFYS VNLLARPTLV ASMHRSFDHR RSVVRAAKAV TERLGKANPT FGEHPNYIPQ 960 WAPCGITFGH DASVTGHVLQ VLIMI

Sequence ? help Back to Top

Protein Sequence Length: 985 aa Download sequence

MADLQRRLPL LLLVVVVFLF VVFLHVCLSC RPWKQRRKRT ASMKRAVLQE ERPMAGMKAR  60
AILPAAEGGR RPATTEPSWR YDPSMYSHLP SWETPLPPSD EEPKGDELPT FPLASGSTQL  120
LSQTVLVGGS ASNERGEYTS LLQQGLGDDD DGGVDLRFGL SSGGAREASR TVITAAHASA  180
CGLQQPRREQ TGPSTVRGGA SVVGGVGSSP AAWQHVSGAP SGERLTDNWD VRTAAATAPP  240
AGSGASVENI TRGVSNMRAH SDGGDDDGCG GDDADDGFRE EVEAGDDDDD NAVLPVGKTG  300
GRGIGRNNRG GRGRSVGRGG RGGVTDDGGK SATYWSTDEQ MVLVRCKREQ EAHLAGLGHN  360
YGRMRTKEWK WVDIAKRMAN GGSPKDADDC MKKWDNLFQN YKKIQSFSPR SNLAALRRPS  420
RHKASRCKAS RRGAISSRYV ALLTVKLLAV KLLAVKLLAA VPALPTVNLF AVKRHRRKAK  480
GRRHIPKSKK VRSGEASGNV PARGSEGWAA AAEMESDDDF GMEEPQAEAT ASTVRQSARQ  540
RAFDHIAPKR MLPPAPEAQQ ARGRDARKDK AAVVVAEGDD DETLERRRQR NLAQDSASLL  600
MTTRLPEKEV VPERHAIEGE AAGAAGGTAT MNSAPVATAR EEAPAAATAR EDARSENTTD  660
REGGDVGPSR VRKETMSREL IDRALLWVDD KAFRTTGEGQ RLYNIIHETR EYFVAIASGL  720
PTTAVSRSVI LPKSSTRVAR ISDPSQLQQA ISRAAKVENV ALRVLHGWVF KSGNRARGYN  780
LAYQYALESV ATDIARAIWY AENWSNVVSA PICGHTIDLN MDLPLWFDVA HIDDRPDDDD  840
MAAYQESTVI FIAQAFRAAV LMGAHIDGDF ISYDRLCRVA DCFRLLLAAT IWIMCMAGDD  900
FRSHYEAFYS VNLLARPTLV ASMHRSFDHR RSVVRAAKAV TERLGKANPT FGEHPNYIPQ  960
WAPCGITFGH DASVTGHVLQ VLIMI