PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG67646.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 1009aa MW: 109298 Da PI: 6.8053

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG67646.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	46.1	1.3e-14	381	459	2	73
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrts 73 W+ +++ aLi+a+r+ + +++ r k ++ +W++v+++++ g++r++++C +kw+nl +++kk++ + + r+ GBG67646.1 381 WSVEHIIALIRAKRDQDAHMQgmghtyaRMKPREWKWQDVAQRLKNVGVNRNAEKCGKKWDNLMQQFKKERGRHRARKR 459 9***********7777777444333367899***********************************999888754 PP

Sequence ? help Back to Top
Protein Sequence Length: 1009 aa Download sequence
MADVFRRLPL LILIVLLLLL VVLFRVCILG NVPPHRRKRR SSMKDARMEA RQAIPRSSGE 60 QVGGRRSGGS LSTVGRASQR VGYDALPPHL QPLADSSDEE EEVERRPQTV SLGSGSTQEW 120 TATELCGTGG GVYEQSFTEL LRPGLGEDEG DGRVNLSFGL STGRSTTPSR TVLVRPHPGA 180 EGGQLTVVDR SARTRALASE TAGANRNSST PQPQAASLSK GAQGRPEWMQ LPSPLSPASE 240 VARGRGVGVD GGTNFLDVGN GLDGREVWRD LRRDHRLRQE EYITRGVEHL HVGDRENENE 300 TDNPPAEVDD DDDDDDDDDN DVECGEGGGG HASPSLQSDM AAKGGKSKPS VRNARPRVKK 360 GQGKGSGGEG DGDAEEKRNF WSVEHIIALI RAKRDQDAHM QGMGHTYARM KPREWKWQDV 420 AQRLKNVGVN RNAEKCGKKW DNLMQQFKKE RGRHRARKRR GGVDARLFAD DGHPLRFWEK 480 EEHEAADFRG ADEMHGETRG ANGVDDGECK QAAMLYLGPA VRGVGSGDGS AKEALCHVRR 540 SQQTHVPRVV GNSEGHSAGR GKAALKQIVE GATPVKKGRH QAKRQRKVVQ AVPAGSARDV 600 VEEAVVEEEM TNDDDDFEDD DDEPLQRKAR VSSRGGVRIN EGGEGTPTAR RGGGVAAANQ 660 PVFVDVARDV VRDVARRDVG GCAKEGAASH ETAQRVLAPL NRPRTPAADV AGSSQAAVEG 720 GTLRSPAVAA RGGAVVVPGE AVEVPKGGDG AATREDDEAL VHRLRGQRAA THAMDAAAKL 780 WEDDNRFWND TQGSAIVRII QEARAYLVAL ARGVQPPAIR RSISLPHNSI PQHKIEDESE 840 LNAAKERALK VQTISLRAIH VGTAEAMDGG RVSYERLKGM AEAMRYLLAA TMWIMRMAGD 900 DPRSHYDAWV FVQLTAKTTL LASMNRQFDA RRHITQSAQV MTDKLGRPPP TFAPPPAYIP 960 DWASKCGVTF SHDATLASPM EAKRLDWLGT GPPEDDDDDA EGDDKGEGG

Sequence ? help Back to Top

Protein Sequence Length: 1009 aa Download sequence

MADVFRRLPL LILIVLLLLL VVLFRVCILG NVPPHRRKRR SSMKDARMEA RQAIPRSSGE  60
QVGGRRSGGS LSTVGRASQR VGYDALPPHL QPLADSSDEE EEVERRPQTV SLGSGSTQEW  120
TATELCGTGG GVYEQSFTEL LRPGLGEDEG DGRVNLSFGL STGRSTTPSR TVLVRPHPGA  180
EGGQLTVVDR SARTRALASE TAGANRNSST PQPQAASLSK GAQGRPEWMQ LPSPLSPASE  240
VARGRGVGVD GGTNFLDVGN GLDGREVWRD LRRDHRLRQE EYITRGVEHL HVGDRENENE  300
TDNPPAEVDD DDDDDDDDDN DVECGEGGGG HASPSLQSDM AAKGGKSKPS VRNARPRVKK  360
GQGKGSGGEG DGDAEEKRNF WSVEHIIALI RAKRDQDAHM QGMGHTYARM KPREWKWQDV  420
AQRLKNVGVN RNAEKCGKKW DNLMQQFKKE RGRHRARKRR GGVDARLFAD DGHPLRFWEK  480
EEHEAADFRG ADEMHGETRG ANGVDDGECK QAAMLYLGPA VRGVGSGDGS AKEALCHVRR  540
SQQTHVPRVV GNSEGHSAGR GKAALKQIVE GATPVKKGRH QAKRQRKVVQ AVPAGSARDV  600
VEEAVVEEEM TNDDDDFEDD DDEPLQRKAR VSSRGGVRIN EGGEGTPTAR RGGGVAAANQ  660
PVFVDVARDV VRDVARRDVG GCAKEGAASH ETAQRVLAPL NRPRTPAADV AGSSQAAVEG  720
GTLRSPAVAA RGGAVVVPGE AVEVPKGGDG AATREDDEAL VHRLRGQRAA THAMDAAAKL  780
WEDDNRFWND TQGSAIVRII QEARAYLVAL ARGVQPPAIR RSISLPHNSI PQHKIEDESE  840
LNAAKERALK VQTISLRAIH VGTAEAMDGG RVSYERLKGM AEAMRYLLAA TMWIMRMAGD  900
DPRSHYDAWV FVQLTAKTTL LASMNRQFDA RRHITQSAQV MTDKLGRPPP TFAPPPAYIP  960
DWASKCGVTF SHDATLASPM EAKRLDWLGT GPPEDDDDDA EGDDKGEGG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	354	362	ARPRVKKGQ