PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG67504.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 817aa MW: 89070.9 Da PI: 9.5406

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG67504.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	34.7	4.6e-11	551	626	2	70
trihelix 2 WtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 W+ ++ aLi+a+r+ + +l+++ ++ +W +v +++ + g+ r + +C +kw+nl + +kk+ + ++ GBG67504.1 551 WSMEHMVALIRAKRDQDAQLQASGhnfarmrTREWKWMDVRERLLKVGVDRPADKCGKKWDNLMQHFKKVHTFKRM 626 9***********9999999763334444499**********************************9887665 PP

Sequence ? help Back to Top
Protein Sequence Length: 817 aa Download sequence
MIVPSVLGES SLETDVKAFP RGVLGASSGH SHLAALPKAP REVPRSGSFR ENRDGGGSLR 60 RRHSFVVWYN GGPVEVWADI TGRRRSTSVG TVATVTKSGG RGPRRAPGDP AARARPRETD 120 RPPTGGHFEI RRAVRPSPTA EVCNVNRRRA SSAITWRLLF VVVRLALTLR LPYMADVFRK 180 LPLLLLVVIL LVVAVFVHVC ILGRLPSRSR RKVGARTSVA MDGRRPTQRM LFGPYPTDRA 240 PICVSADRRA AGPSPYEGLP PHLQSLPDSD EGEVEVDEST IVPLGSGSTQ EWTGSQLYDR 300 RGTKYGQSFT SLLHDGAEEE DCLLPVDLTF DLRSGNPSSV TRTVLVNPYP DDDAGQVTFG 360 GRGTRGVAAA EVTSGRTMAW PRTQATSGPS VPRTVGQRPE WMTLSPPLSG GHDRVRRPVD 420 RAVTHEDFPS EGAHGDGRRV WKDARQELQL QQEESITKGV ERLRVGEQSG QAHVAAGGGD 480 AWANADEVQC DVNDDDSGDV FPLRAPNMGG RGGRGDRGST STRAVRRRTR STTASADAEG 540 EGGGEGGQNF WSMEHMVALI RAKRDQDAQL QASGHNFARM RTREWKWMDV RERLLKVGVD 600 RPADKCGKKW DNLMQHFKKV HTFKRMSGKE DFFQLTSQLR AKKGFNFNMD RAIFEEIKGA 660 KERSHTISPT NVADTGGAGG VQLPSAQSAT LESVGDGEAG GDGNDEDDSS ARGGSQTSGG 720 PAGFGKRKNV QRQTFEALSE CMDKHGALMA STMESASRRQ CETMESASKR QCSIQIWQCE 780 AIEVEVEIQK QHCSASTEVS KLMCQALLEI AKAIRER

Sequence ? help Back to Top

Protein Sequence Length: 817 aa Download sequence

MIVPSVLGES SLETDVKAFP RGVLGASSGH SHLAALPKAP REVPRSGSFR ENRDGGGSLR  60
RRHSFVVWYN GGPVEVWADI TGRRRSTSVG TVATVTKSGG RGPRRAPGDP AARARPRETD  120
RPPTGGHFEI RRAVRPSPTA EVCNVNRRRA SSAITWRLLF VVVRLALTLR LPYMADVFRK  180
LPLLLLVVIL LVVAVFVHVC ILGRLPSRSR RKVGARTSVA MDGRRPTQRM LFGPYPTDRA  240
PICVSADRRA AGPSPYEGLP PHLQSLPDSD EGEVEVDEST IVPLGSGSTQ EWTGSQLYDR  300
RGTKYGQSFT SLLHDGAEEE DCLLPVDLTF DLRSGNPSSV TRTVLVNPYP DDDAGQVTFG  360
GRGTRGVAAA EVTSGRTMAW PRTQATSGPS VPRTVGQRPE WMTLSPPLSG GHDRVRRPVD  420
RAVTHEDFPS EGAHGDGRRV WKDARQELQL QQEESITKGV ERLRVGEQSG QAHVAAGGGD  480
AWANADEVQC DVNDDDSGDV FPLRAPNMGG RGGRGDRGST STRAVRRRTR STTASADAEG  540
EGGGEGGQNF WSMEHMVALI RAKRDQDAQL QASGHNFARM RTREWKWMDV RERLLKVGVD  600
RPADKCGKKW DNLMQHFKKV HTFKRMSGKE DFFQLTSQLR AKKGFNFNMD RAIFEEIKGA  660
KERSHTISPT NVADTGGAGG VQLPSAQSAT LESVGDGEAG GDGNDEDDSS ARGGSQTSGG  720
PAGFGKRKNV QRQTFEALSE CMDKHGALMA STMESASRRQ CETMESASKR QCSIQIWQCE  780
AIEVEVEIQK QHCSASTEVS KLMCQALLEI AKAIRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	1e-07	Trihelix family protein