PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG67449.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 424aa    MW: 47114.6 Da    PI: 8.2771
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG67449.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix42.51.7e-13352422265
    trihelix   2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkik 65 
                 W+ + + aLi+a+r+ +++l+       r +l++ +W  v++++++ g++r + qC +kw+nl +++kk+ 
  GBG67449.1 352 WSADDIIALIRAKRDQDSHLQgmghayaRMQLREWKWLNVAQRLKKVGVNRDADQCWKKWDNLMQQFKKVH 422
                 **************87777774443333668**************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    
MIDVFRRLPL LVLVVLLLLL LVVFHVCILG NIPRRACRRR SLKKDVRMEG RKVICRSAGE  60
QGGGQRSRQS PSRSSRPSER SGYVHLPPHL QPLSDTSDEE ADDRRSRTVP LGSRSTQEWA  120
TTEVCGSRDG CYGHSYTKLL QQGLSGDEGD GGVNLSFGLC SGRSSAASRT VIITPHPDDD  180
RGQVMVVARS LKSPTPVLEA SGNNRDPLRQ QFQSPFVSRA RRRGECGETD CGIADLGDAR  240
DGREVWAEHG RELQSGWEES ITRGVQRLRV GEKENDSDAT VMDVDDQEWN DNDSEGGEED  300
AGYISPFKQS SMGGRGGKTK ACGRNGRQGE KAAGKGSNAE GDLDAEGGHH FWSADDIIAL  360
IRAKRDQDSH LQGMGHAYAR MQLREWKWLN VAQRLKKVGV NRDADQCWKK WDNLMQQFKK  420
VHHF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.12e-06Trihelix family protein