PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG67364.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 536aa MW: 58303.2 Da PI: 4.9935

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG67364.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	41.1	4.7e-13	346	426	1	76
trihelix 1 rWtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsess 76 rW + e+ L++ + e+++++++++ lk+ lW++vs++m+e +++r+ + Ck+++ +++ y+ +k++++ s+++ GBG67364.1 346 RWGEXETTMLLRRVYEVKTNMGENSeamgiapLKQRLWRDVSERMKEAQYNREDEDCKNRFHYVRNNYRLVKDHNRW--SGNQ 426 8**********9999999998766777777****************************************996..3444 PP

Sequence ? help Back to Top
Protein Sequence Length: 536 aa Download sequence
MKSRYGSIPR EERGNSEETE RRRSEIASSF PHRGTGMRTL THTRCIGDWG FTPDSEVQES 60 DGMQIPSSQV DLAFGGRRIT ADDGDEDQLR ERLRLRAMDM AGEQGFYSPL TSSQHPSPPR 120 FTFAPNYSHR CADLPDTPEA QRTVVDCPLS PLHSTASAPA ATGSPSVACH STPASVRKGV 180 TGIFPSLQQE TGKPSTSPPV RNLQYGSPDI DVRCQPEPAG EASLHNRTFL QRLIHVVEDG 240 DFDSQEIFVQ GLDQQHGNSG STPPAVRGMP XEGGMPCGVD IRHVDQTSTR HDALCSELGN 300 ASGGSTSISV GKAVAEAVAP AVAEAVAPAA ASGSVDGGKK KKVSNRWGEX ETTMLLRRVY 360 EVKTNMGENS EAMGIAPLKQ RLWRDVSERM KEAQYNREDE DCKNRFHYVR NNYRLVKDHN 420 RWSGNQXYWS MDQATRKANS LDFMMRRDWY DIINVHEVDK DTINPNSLTD PGAGEHNMDN 480 VHDSDVEVGD DDAEEEEAME DGSAIRGGSH TGGSGGGAEP PLYDCAGGGG GTSMPG

Sequence ? help Back to Top

Protein Sequence Length: 536 aa Download sequence

MKSRYGSIPR EERGNSEETE RRRSEIASSF PHRGTGMRTL THTRCIGDWG FTPDSEVQES  60
DGMQIPSSQV DLAFGGRRIT ADDGDEDQLR ERLRLRAMDM AGEQGFYSPL TSSQHPSPPR  120
FTFAPNYSHR CADLPDTPEA QRTVVDCPLS PLHSTASAPA ATGSPSVACH STPASVRKGV  180
TGIFPSLQQE TGKPSTSPPV RNLQYGSPDI DVRCQPEPAG EASLHNRTFL QRLIHVVEDG  240
DFDSQEIFVQ GLDQQHGNSG STPPAVRGMP XEGGMPCGVD IRHVDQTSTR HDALCSELGN  300
ASGGSTSISV GKAVAEAVAP AVAEAVAPAA ASGSVDGGKK KKVSNRWGEX ETTMLLRRVY  360
EVKTNMGENS EAMGIAPLKQ RLWRDVSERM KEAQYNREDE DCKNRFHYVR NNYRLVKDHN  420
RWSGNQXYWS MDQATRKANS LDFMMRRDWY DIINVHEVDK DTINPNSLTD PGAGEHNMDN  480
VHDSDVEVGD DDAEEEEAME DGSAIRGGSH TGGSGGGAEP PLYDCAGGGG GTSMPG