PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG67296.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 1235aa MW: 134044 Da PI: 9.49

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG67296.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	36.5	1.3e-11	372	444	5	70
trihelix 5 qevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 + + aLi+a+++ + +l+ r k ++ +W +v+ ++++ g+er++ +C +kw+nl +++kk+ + ++ GBG67296.1 372 DDIIALIRAKSDQKAHLQgmgdayaRMKPREWKWLDVATRLKKVGVEREADRCGKKWDNLMQQFKKVHHFQGL 444 56899****666666633333226789999********************************9987765 PP

Sequence ? help Back to Top
Protein Sequence Length: 1235 aa Download sequence
MLFIADVFRR LPLLLLVVLL LLLVVFHVCI IGSLPRRGRK RRSLKNNDRM EGRQAISGSA 60 GEHGGRWSRH SPSNSPRPSE RSGYAHLPPH LQPLPDMDDE EGDDRRSRPV PLGSGSTQEW 120 AGTELFGGRE GCKGQSYTEL LQQGLIDTDG DGGVNLSFGL GSGRSAAVSR TVIVTPHPDD 180 DGGDVTVVVN PHPDDDGGDV TISDHPGLQR RCGRLRGTTR ILRGSNFGRR LCVGVPPLAP 240 SGCSLRLPCP PVRVQAAVLA SVGRRRVALV MLVTHVTEGR CGQNSDGKTG TTARTQWGTR 300 TTPNGTTTAL KVGRTTQATF RRRSSQPLWE VGTGRRSRVA AMVVGTKGRQ ARAAMSKVTL 360 MVKEVVTSGS VDDIIALIRA KSDQKAHLQG MGDAYARMKP REWKWLDVAT RLKKVGVERE 420 ADRCGKKWDN LMQQFKKVHH FQGLSGKQDV FQLSGKDRMS KGFSFNVDRA VYDEILGSTA 480 KNHTINPKNI TDTGAQGGVR LPSASSVDPE CVGDEHNDDD DGSTKGSSQT TSGAGGFDKR 540 KSTRQQTFEA MIDCMEKHGA LMVSTIESNN KRHCSIAIRQ CEVLEVEIEV QKKHYAASDE 600 VNKLMCHALL EIAKAIGKLV FGDILIDEHI FSPVVFTAIV AFPNIVSSPS SSRLSSLPRP 660 SSNTTPTPPS LLTVGLDNAV HVIEAKRVNK LVVGVFCAMS SRGSACGKAA ANLAQQPPTR 720 EKKGRRMANE KRKILQGASA HGGYVVDEDL VPEDVATQKG TDFEDSDDMP LQRKSSRRGS 780 GGLRIDDAGD RRCAGGRAAP EDVLDVDAAT AAREGGGNRA PLPRMTPPTD TQERVVRLRT 840 PLTPRSRTAA DVVVSGGASQ AAKGVRAGGA AVGVARAGYA AGGGGSNAGK GATTGVKAGD 900 VAGEGDDDEA LVNRLRQRNT REGMEAAAKL WVDDLRFWNE REGFVIVKLI VEVHGYLVAV 960 AREEQPPPIR RSIILPHNNI PQHKIADESE LNAAKERALK NRQRGYHAAY QYALNRAATD 1020 IARAMWMGED WRYCVSLMVV HHTLDMDMKL PLWFMGTDVE DRQEDDGLAA YQEASIQRLL 1080 GAFTSAVIIA EATDGGRVSH ERLKTMADAM RMMLAATMWL MRMAGDDHRA HYDAWVFVQL 1140 TAKPTLVPSM HRCFDVHRHI VQAAIVITDK LASPPITLID SPMYVPDKAS IGVKFSHDAT 1200 LSSPMEAKKM DGLGTGPPED EDDRERRQTG KRGGR

Sequence ? help Back to Top

Protein Sequence Length: 1235 aa Download sequence

MLFIADVFRR LPLLLLVVLL LLLVVFHVCI IGSLPRRGRK RRSLKNNDRM EGRQAISGSA  60
GEHGGRWSRH SPSNSPRPSE RSGYAHLPPH LQPLPDMDDE EGDDRRSRPV PLGSGSTQEW  120
AGTELFGGRE GCKGQSYTEL LQQGLIDTDG DGGVNLSFGL GSGRSAAVSR TVIVTPHPDD  180
DGGDVTVVVN PHPDDDGGDV TISDHPGLQR RCGRLRGTTR ILRGSNFGRR LCVGVPPLAP  240
SGCSLRLPCP PVRVQAAVLA SVGRRRVALV MLVTHVTEGR CGQNSDGKTG TTARTQWGTR  300
TTPNGTTTAL KVGRTTQATF RRRSSQPLWE VGTGRRSRVA AMVVGTKGRQ ARAAMSKVTL  360
MVKEVVTSGS VDDIIALIRA KSDQKAHLQG MGDAYARMKP REWKWLDVAT RLKKVGVERE  420
ADRCGKKWDN LMQQFKKVHH FQGLSGKQDV FQLSGKDRMS KGFSFNVDRA VYDEILGSTA  480
KNHTINPKNI TDTGAQGGVR LPSASSVDPE CVGDEHNDDD DGSTKGSSQT TSGAGGFDKR  540
KSTRQQTFEA MIDCMEKHGA LMVSTIESNN KRHCSIAIRQ CEVLEVEIEV QKKHYAASDE  600
VNKLMCHALL EIAKAIGKLV FGDILIDEHI FSPVVFTAIV AFPNIVSSPS SSRLSSLPRP  660
SSNTTPTPPS LLTVGLDNAV HVIEAKRVNK LVVGVFCAMS SRGSACGKAA ANLAQQPPTR  720
EKKGRRMANE KRKILQGASA HGGYVVDEDL VPEDVATQKG TDFEDSDDMP LQRKSSRRGS  780
GGLRIDDAGD RRCAGGRAAP EDVLDVDAAT AAREGGGNRA PLPRMTPPTD TQERVVRLRT  840
PLTPRSRTAA DVVVSGGASQ AAKGVRAGGA AVGVARAGYA AGGGGSNAGK GATTGVKAGD  900
VAGEGDDDEA LVNRLRQRNT REGMEAAAKL WVDDLRFWNE REGFVIVKLI VEVHGYLVAV  960
AREEQPPPIR RSIILPHNNI PQHKIADESE LNAAKERALK NRQRGYHAAY QYALNRAATD  1020
IARAMWMGED WRYCVSLMVV HHTLDMDMKL PLWFMGTDVE DRQEDDGLAA YQEASIQRLL  1080
GAFTSAVIIA EATDGGRVSH ERLKTMADAM RMMLAATMWL MRMAGDDHRA HYDAWVFVQL  1140
TAKPTLVPSM HRCFDVHRHI VQAAIVITDK LASPPITLID SPMYVPDKAS IGVKFSHDAT  1200
LSSPMEAKKM DGLGTGPPED EDDRERRQTG KRGGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33240.1	2e-06	Trihelix family protein