PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG67281.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 594aa MW: 61754.7 Da PI: 8.3226

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG67281.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	25.8	2.8e-08	312	376	2	60
trihelix 2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkr 60 Wt +e +L ++ +++ + +++ + +W++ +++mre+g++r+ + C++kw +l k+ GBG67281.1 312 WTLEERVKLATVAAKDDALMADAEgpqrhmTRCRRWQWTADRMREEGYSRTGEDCRKKWAELVKK 376 6666666665555555555554433334448889***************************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 594 aa Download sequence
MAGRGFTAEL YGDVGGSSGY YEAGGEVSEC TQARSDGGHP PPSWSYSPQT GCNIMPGEMQ 60 LTHSSHNVAV STHASATSAF GRPAMPPSAA TSSRQRTYNI SVGGQGGSSA TGAGNWGSSE 120 YTREAPGCNQ RSPAMPAFLS ISTRFGSTRD NTVEGVPSPN LGLQSPQRRL PQGGHQPCLR 180 PAGFTGQPTF HPQGSLQRAG GDGHLSGGES RNTHVTTPPP MRGSRASGVE RTDAVGEGYM 240 HDTGGQWEFG GNGSEEGGGG GKDAASGASG STAGTTGMPS QERAPTNVMP HSSGQCRKAP 300 TPSAPPKKNS PWTLEERVKL ATVAAKDDAL MADAEGPQRH MTRCRRWQWT ADRMREEGYS 360 RTGEDCRKKW AELVKKGSGQ QSYFDLTTDE RRKKGVSLTL EKQLWDAMEW YRLKASVRCD 420 NTLASEDLRG GGSVPGSEGG SEGGGTNVSD GSAKTRRTSS GKAREGESAA NMNGVASAME 480 ESTRAVCEGL DRAAXTLARA TIEGASMMAA RMGKMATGIG AVAGAMQEGX RATIEGASMM 540 AARMGKMATG IGAVAGAMQE GNVVLEMLVG VMAGRGSRRG RGVDEGAETD PSSR

Sequence ? help Back to Top

Protein Sequence Length: 594 aa Download sequence

MAGRGFTAEL YGDVGGSSGY YEAGGEVSEC TQARSDGGHP PPSWSYSPQT GCNIMPGEMQ  60
LTHSSHNVAV STHASATSAF GRPAMPPSAA TSSRQRTYNI SVGGQGGSSA TGAGNWGSSE  120
YTREAPGCNQ RSPAMPAFLS ISTRFGSTRD NTVEGVPSPN LGLQSPQRRL PQGGHQPCLR  180
PAGFTGQPTF HPQGSLQRAG GDGHLSGGES RNTHVTTPPP MRGSRASGVE RTDAVGEGYM  240
HDTGGQWEFG GNGSEEGGGG GKDAASGASG STAGTTGMPS QERAPTNVMP HSSGQCRKAP  300
TPSAPPKKNS PWTLEERVKL ATVAAKDDAL MADAEGPQRH MTRCRRWQWT ADRMREEGYS  360
RTGEDCRKKW AELVKKGSGQ QSYFDLTTDE RRKKGVSLTL EKQLWDAMEW YRLKASVRCD  420
NTLASEDLRG GGSVPGSEGG SEGGGTNVSD GSAKTRRTSS GKAREGESAA NMNGVASAME  480
ESTRAVCEGL DRAAXTLARA TIEGASMMAA RMGKMATGIG AVAGAMQEGX RATIEGASMM  540
AARMGKMATG IGAVAGAMQE GNVVLEMLVG VMAGRGSRRG RGVDEGAETD PSSR